Return to main results Retrieve Phyre Job Id

Job DescriptionP30235
Confidence99.78%DateThu Jan 5 11:46:18 GMT 2012
Rank45Aligned Residues247
% Identity15%Templatec3mbjA_
PDB info PDB header:transferaseChain: A: PDB Molecule:putative phosphomethylpyrimidine kinase; PDBTitle: crystal structure of a putative phosphomethylpyrimidine kinase2 (bt_4458) from bacteroides thetaiotaomicron vpi-5482 at 2.10 a3 resolution (rhombohedral form)
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40........ .50.........60.........70.........80
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Query Sequence  REKDYVVIIGSANIDVAGYSHESLNYADSNPGKIKFTPGGVGRNIAQ. NLALLGNKAWLLSAVGSDFYGQSLLTQTNQSG
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Template Sequence  NKVKKIAAVHDLS. . . . . . . . . . . . . . . . . . . . . . . GXGRVSLTVVIPILSSXGFQV. . . . . . . . . . . . . . . . . . . . . . .
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   4.....10...... ...20.........30.......
 
   81........90.........100.........110.........120.........130.........140.........150.......
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Query Sequence  VYVDKCLIVPGENTSSYLSLLDNTGEMLVAINDMNISNAITAEYLAQHGEFIQRAKVIVADCNISEEALAWILDNAA. . .
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Template Sequence  . . . . . . . . . . . CPLPTAVLSNHTQYPGFSFL. . . . DLTDEXPKIIAEWKKLEVQFDAIYTGYLGSPRQIQIVSDFIKDFR
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   38.40.........50....... ..60.........70.........80.........90.........100..
 
   158.160...... ...170.........180.........190.........200 .........210.........220.
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Query Sequence  . . NVPVFVDPV. . . . . . . . . . . SAWKCVKVRDRLNQIHTLKPNRLEAETLSGIALS. . . GREDVAKVAAWFHQHGLNRLV
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Template Sequence  QPDSLIVADPVLGDNGRLYTNFDXEXVKEXRHLITKADVITPNLTELFYLLDEPYKADSTDEELKEYLRLLSDKGPQVVI
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   103......110.........120.........130.........140.........150.........160.........170.........180..
 
   222.. .....230.........240.........250.........260.........270.........280.........290......
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Query Sequence  LSM. . . . GGDGVYYSDISGESGWSAPIKTNVINVTGAGDAMMAGLASCWVDGMPFAESVRFAQGCSSMALSCEYTNNPD.
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Template Sequence  ITSVPVHHKTSVYAYNRQGNRYWKVTCPYLPAHYPGTGDTFTSVITGSLXQGDSLPXALDRATQFILQGIRATFGYEYDN
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   183......190.........200.........210.........220.........230.........240.........250.........260..
 
   297..300.........
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Query Sequence  . . . LSIANVISLVENA
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Template Sequence  REGILLEKVLHNLDXP
Template Known Secondary structure  GG


GGGGGS
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   266...270.........280.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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