Job Description P30235 Confidence 100.00% Date Thu Jan 5 11:46:18 GMT 2012 Rank 1 Aligned Residues 309 % Identity 31% Template c3kzhA_ PDB info PDB header:transferase Chain: A: PDB Molecule:probable sugar kinase; PDBTitle: crystal structure of a putative sugar kinase from2 clostridium perfringens Resolution 2.45 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	K	D	Y	V	V	I	I	G	S	A	N	I	D	V	A	G	Y	S	H	E	S	L	N	Y	A	D	S	N	P	G	K	I	K	F	T	P	G	G	V	G	R	N	I	A	Q	N	L	A	L	L	G	N	K	A	W	L	L	S	A	V	G	S	D	F	Y	G	Q	S	L	L	T	Q	T	N	Q	S	G	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	K	E	P	Y	L	L	V	F	G	A	S	V	V	D	V	F	G	F	S	K	A	S	Y	R	P	Y	N	S	T	P	G	H	V	K	I	S	F	G	G	V	C	R	N	I	A	E	N	X	A	R	V	G	V	N	T	N	F	X	S	I	L	G	N	D	E	H	G	K	S	I	V	E	H	S	K	K	I	G	Y
Template Known Secondary structure																						S	S				T	T	S																								T	T											S	S														T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	V	D	K	C	L	I	V	P	G	E	N	T	S	S	Y	L	S	L	L	D	N	T	G	E	M	L	V	A	I	N	D	M	N	I	S	N	A	I	T	A	E	Y	L	A	Q	H	G	E	F	I	Q	R	A	K	V	I	V	A	D	C	N	I	S	E	E	A	L	A	W	I	L	D	N	A	A	N	V	P	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	X	D	D	S	X	V	I	E	G	G	S	T	P	T	Y	L	A	I	L	D	E	N	G	E	X	V	S	A	I	A	D	X	K	S	I	G	A	X	N	T	D	F	I	D	S	K	R	E	I	F	E	N	A	E	Y	T	V	L	D	S	D	N	P	E	I	X	E	Y	L	L	K	N	F	K	D	K	T	N	F
Template Known Secondary structure				T	T					T	T												T	T	S										G	G	G	G	G									T						T		S						S	S													T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	V	D	P	V	S	A	W	K	C	V	K	V	R	D	R	L	N	Q	I	H	T	L	K	P	N	R	L	E	A	E	T	L	S	G	I	A	L	S	G	R	E	D	V	A	K	V	A	A	W	F	H	Q	H	G	L	N	R	L	V	L	S	M	G	G	D	G	V	Y	Y	S	D	I	S	G	E	S	G	W	S
Query Conservation
Alig confidence																																																																										.
Template Conservation																																																																										.
Template Sequence		I	L	D	P	V	S	A	E	K	A	S	W	V	K	H	L	I	K	D	F	H	T	I	K	P	N	R	H	E	A	E	I	L	A	G	F	P	I	T	D	T	D	D	L	I	K	A	S	N	Y	F	L	G	L	G	I	K	K	V	F	I	S	L	D	A	D	G	I	F	Y	N	D	.	G	V	S	C	G	K	I
Template Known Secondary structure							S						T	S	T	T	T	G	G	G		S					B									T	S				S															T									G	G	G							.	S	S
Template Predicted Secondary structure																																																																										.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.		.	.	.	.	240	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	I	K	T	N	V	I	N	V	T	G	A	G	D	A	M	M	A	G	L	A	S	C	W	V	D	G	M	P	F	A	E	S	V	R	F	A	Q	G	C	S	S	M	A	L	S	C	E	Y	T	N	N	P	D	L	S	I	A	N	V	I	S	L	V	E	N	A	E	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	A	T	E	V	D	V	K	N	V	T	G	A	G	D	S	F	V	A	G	L	G	Y	G	Y	X	N	K	X	P	I	E	D	I	V	K	F	A	X	T	X	S	N	I	T	I	S	H	E	E	T	I	H	P	D	X	A	L	D	T	V	L	A	K	L	E	K	T	T	W
Template Known Secondary structure				S	S				S			T	T															T	T																			T	S	S	S	S	S		T	T		S										T
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions