Job Description P30235 Confidence 100.00% Date Thu Jan 5 11:46:18 GMT 2012 Rank 35 Aligned Residues 287 % Identity 18% Template c3kd6B_ PDB info PDB header:transferase Chain: B: PDB Molecule:carbohydrate kinase, pfkb family; PDBTitle: crystal structure of nucleoside kinase from chlorobium tepidum in2 complex with amp Resolution 1.88 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																																																				.
Query SS confidence																																																				.
Query Sequence		V	V	I	I	G	S	A	N	I	D	V	A	G	Y	S	H	E	S	L	N	Y	A	D	S	N	P	G	K	I	K	F	T	P	G	G	V	G	R	N	I	A	Q	N	L	A	L	L	G	N	K	.	A	W	L	L	S	A	V	G	S	D	F	Y	G	Q	S	L	L	T	Q	T	N	Q	S	G	V	Y	V	D	K
Query Conservation																																																				.
Alig confidence																	.	.	.	.	.	.	.	.	.	.																										.											.
Template Conservation																	.	.	.	.	.	.	.	.	.	.																																					.
Template Sequence		L	L	V	I	G	S	L	A	F	D	D	I	E	T	P	.	.	.	.	.	.	.	.	.	.	F	G	R	S	D	N	T	L	G	G	S	S	T	Y	I	A	L	S	A	S	Y	F	T	D	E	P	I	R	X	V	G	V	V	G	S	D	.	F	G	K	E	H	F	D	L	L	H	A	K	N	I	D	T	R	G
Template Known Secondary structure						S										S	.	.	.	.	.	.	.	.	.	.	S																			T	T	T		S	S										T	T	.	S											T	T
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.																																					.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.											.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	L	I	V	P	G	E	N	T	S	S	Y	L	S	L	L	D	N	T	G	E	M	L	V	A	I	N	D	M	N	I	S	N	A	I	T	A	E	Y	L	A	Q	H	G	E	F	I	Q	R	A	K	V	I	V	A	D	C	N	I	S	E	E	A	L	A	W	I	L	D	N	A	A	N	V	P	V	F	V	D	P
Query Conservation
Alig confidence																													.	.	.
Template Conservation																													.	.	.
Template Sequence		I	Q	V	I	E	D	G	K	T	F	R	W	A	G	R	Y	H	Y	D	X	N	T	R	D	T	L	D	.	.	.	T	Q	L	N	V	F	A	E	F	D	P	H	V	P	Q	Y	Y	R	D	S	K	F	V	C	L	G	N	I	D	P	E	L	Q	L	K	V	L	D	Q	I	D	D	P	K	L	V	V	C	D	T
Template Known Secondary structure						T	T												T	T	S	S							.	.	.				G	G	G	T	T							G	G	G	T	T		S						S	S										T	T		S	S		S
Template Predicted Secondary structure																													.	.	.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.				.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		166	.	.				.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure					.	.	.
Query SS confidence					.	.	.
Query Sequence		V	S	A	.	.	.	W	K	C	V	K	V	R	D	R	L	N	Q	I	H	T	L	K	P	N	R	L	E	A	E	T	L	S	G	I	A	L	S	G	R	E	D	V	A	K	V	A	A	W	F	H	Q	H	G	L	N	R	L	V	L	S	M	G	G	D	G	V	Y	Y	S	D	I	S	G	E	S	G	W	S	A
Query Conservation					.	.	.
Alig confidence					.	.	.																												.	.	.	.	.
Template Conservation																																			.	.	.	.	.
Template Sequence		X	N	F	W	I	E	G	K	P	E	E	L	K	K	V	L	A	R	V	D	V	F	I	V	N	D	S	E	A	R	L	L	S	.	.	.	.	.	G	D	P	N	L	V	K	T	A	R	I	I	R	E	X	G	P	K	T	L	I	I	K	K	G	E	H	G	A	L	L	F	T	D	N	G	I	F	A	A	P	A
Template Known Secondary structure																		T	T		S														.	.	.	.	.	S		S											T	T	S		S							T	T	S							T	T
Template Predicted Secondary structure																																			.	.	.	.	.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.						.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.						.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.		.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure																																.	.	.	.	.																							.
Query SS confidence																																.	.	.	.	.																							.
Query Sequence		P	I	K	T	N	V	I	N	V	T	G	A	G	D	A	M	M	A	G	L	A	S	C	W	V	D	G	M	P	F	.	.	.	.	.	A	E	S	V	R	F	A	Q	G	C	S	S	M	A	L	S	C	E	Y	T	N	N	.	P	D	L	S	I	A	N	V	I	S	L	V	E	N	A	E	C	L
Query Conservation																																.	.	.	.	.																							.
Alig confidence																																.	.	.	.	.																							.
Template Conservation
Template Sequence		F	P	L	E	S	I	Y	D	P	T	G	A	G	D	T	F	A	G	G	F	I	G	H	L	A	R	C	G	N	T	S	E	A	E	X	R	K	A	V	L	Y	G	S	A	X	A	S	F	C	V	E	Q	F	G	P	Y	R	Y	N	D	L	D	L	L	E	V	D	D	R	Y	Q	S	F	L	E	L
Template Known Secondary structure			T	T				S			T	T																				S																			T	T	S	S	T	T	G	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions