Job Description P30235 Confidence 100.00% Date Thu Jan 5 11:46:18 GMT 2012 Rank 6 Aligned Residues 300 % Identity 15% Template c2rbcA_ PDB info PDB header:transferase Chain: A: PDB Molecule:sugar kinase; PDBTitle: crystal structure of a putative ribokinase from agrobacterium2 tumefaciens Resolution 1.90 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		K	D	Y	V	V	I	I	G	S	A	N	I	D	V	A	G	Y	S	H	E	S	L	N	Y	A	D	S	.	N	P	G	K	I	K	F	T	P	G	G	V	G	R	N	I	A	Q	N	L	A	L	L	G	N	K	A	W	L	L	S	A	V	G	S	D	F	Y	G	Q	S	L	L	T	Q	T	N	Q	S	G	V	Y
Query Conservation																													.
Alig confidence																													.
Template Conservation
Template Sequence		G	K	H	V	L	C	V	G	A	A	V	L	D	T	L	F	R	V	A	D	X	P	K	G	E	G	K	V	L	P	Y	E	V	L	Q	I	A	E	G	X	A	S	S	A	A	Y	A	V	H	R	X	G	G	R	A	S	L	W	G	A	V	G	D	D	E	T	G	T	R	I	L	R	D	L	S	E	S	G	I	D
Template Known Secondary structure									S											S	S				S	S	S					S																				T	T											S	S													T	T
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	K	C	L	I	V	P	G	E	N	T	S	S	Y	L	S	L	L	D	N	T	G	E	M	L	V	A	I	N	D	M	N	I	S	N	A	I	T	A	E	Y	L	A	Q	H	G	E	F	I	Q	R	A	K	V	I	V	A	D	C	N	I	S	E	E	A	L	A	W	I	L	D	N	A	A	N	V	P	V	F
Query Conservation
Alig confidence																																.	.	.
Template Conservation																																.	.	.
Template Sequence		T	S	G	X	T	V	A	P	G	A	R	S	A	L	S	T	I	I	I	D	N	R	G	E	R	L	I	V	P	F	.	.	.	Y	D	H	R	L	H	E	K	K	R	A	C	T	P	E	D	I	A	L	F	D	A	V	L	V	D	V	R	W	P	E	L	A	L	D	V	L	T	V	A	R	A	L	G	K	P	A
Template Known Secondary structure			T	T					T	T												T	T	S								.	.	.			G	G	G	G	S	S										T	T		S						S	S	S														T	T
Template Predicted Secondary structure																																.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.				.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.		.	.	.	.	.	.	240	.
Predicted Secondary structure																																																																									.
Query SS confidence																																																																									.
Query Sequence		V	D	P	V	S	A	W	K	C	V	K	V	R	D	R	L	N	Q	I	H	T	L	K	P	N	R	L	E	A	E	T	L	S	G	I	A	L	S	G	R	E	D	V	A	K	V	A	A	W	F	H	Q	H	G	L	N	R	L	V	L	S	M	G	G	D	G	V	Y	Y	S	D	.	I	S	G	E	S	G	W	S
Query Conservation																																																																									.
Alig confidence																																						.	.	.	.																																.
Template Conservation																																						.	.	.	.
Template Sequence		I	L	D	G	D	V	A	P	V	E	T	L	E	G	L	A	P	A	A	T	H	I	V	F	S	E	P	A	A	T	R	L	T	G	L	E	.	.	.	.	T	V	K	D	X	L	P	V	L	H	A	R	Y	P	Q	T	F	I	A	V	T	A	G	P	A	G	C	W	W	T	E	A	D	D	P	T	V	H	F	Q
Template Known Secondary structure							S										G	G	G		S																S	.	.	.	.	S												S	T	T	S							G	G	G							T	T
Template Predicted Secondary structure																																						.	.	.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.					200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	I	K	T	N	V	I	N	V	T	G	A	G	D	A	M	M	A	G	L	A	S	C	W	V	D	G	M	P	F	A	E	S	V	R	F	A	Q	G	C	S	S	M	A	L	S	C	E	Y	T	N	N	P	D	L	S	I	A	N	V	I	S	L	V	E	N	A	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	T	X	Q	V	E	A	V	D	T	L	A	A	G	D	I	F	H	G	T	F	A	L	A	X	A	E	G	X	Q	S	R	A	A	V	R	L	S	S	V	A	A	A	L	K	C	T	V	F	G	G	R	I	G	A	P	T	R	E	E	T	E	E	A	X	R	Q	W	L
Template Known Secondary structure									S			T	T															T	T																			T	S	S	S	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions