Job Description P30235 Confidence 21.97% Date Thu Jan 5 11:46:18 GMT 2012 Rank 112 Aligned Residues 57 % Identity 12% Template c1q5rD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:proteasome alpha-type subunit 1; PDBTitle: the rhodococcus 20s proteasome with unprocessed pro-peptides Resolution 3.10 Å

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		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.		.	270	.	.	.	.	.	.	.	.	.	280	.	.														.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.															.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.															.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	G	A	G	D	A	M	M	A	G	L	A	S	C	W	V	D	.	G	M	P	F	A	E	S	V	R	F	A	Q	G	C	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	M	A	L	S	C	E	Y	T	N	N	P	D	L	S	I	A	N	V	I	S	L	V	E	N
Query Conservation																			.															.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	G	G	T	T	E	P	I	A	T	A	M	R	E	S	Y	R	A	D	L	D	L	E	A	A	V	G	I	A	V	N	A	L	R	Q	G	G	V	D	V	A	S	L	E	V	A	V	L	D	Q	S	R	P	R	R	A	F	R	R	I	A	G	T	A	L	E	Q	L	V	P	A
Template Known Secondary structure			S	S											T	T			T	T																S					S	S									T	T	S	S	S								S					T	T
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions