Job Description P39267 Confidence 9.59% Date Thu Jan 5 11:58:39 GMT 2012 Rank 42 Aligned Residues 65 % Identity 17% Template c2ieqC_ PDB info PDB header:viral protein Chain: C: PDB Molecule:spike glycoprotein; PDBTitle: core structure of s2 from the human coronavirus nl63 spike2 glycoprotein Resolution 1.75 Å

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		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	K	L	A	S	M	L	D	P	G	H	L	A	L	T	Q	I	A	Q	H	L	A	L	L	Q	K	M	D	H	R	Q	H	S	A	F	P	E	L	P	Q	Q	I	A	A	L	Y	E	W	F	S	A	R	C	R	W	K	E	K	A	L	T	Q	R	G	L	L
Query Conservation
Alig confidence																																													.	.
Template Conservation																																													.	.
Template Sequence		F	S	S	V	N	D	A	I	T	Q	T	A	E	A	I	H	T	V	T	I	A	L	N	K	I	Q	D	V	V	N	Q	Q	G	S	A	L	N	H	L	T	S	Q	L	.	.	T	Y	L	N	L	S	S	E	L	K	Q	L	E	A	K	T	A	S	L	F	Q	T
Template Known Secondary structure																																													.	.
Template Predicted Secondary structure																																													.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.			.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions