Job Description P39267 Confidence 27.81% Date Thu Jan 5 11:58:39 GMT 2012 Rank 13 Aligned Residues 34 % Identity 15% Template c1jekA_ PDB info PDB header:viral protein Chain: A: PDB Molecule:env polyprotein; PDBTitle: visna tm core structure Resolution 1.50 Å

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		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120				.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.
Query SS confidence																		.	.	.
Query Sequence		Q	H	S	A	F	P	E	L	P	Q	Q	I	A	A	L	Y	.	.	.	E	W	F	S	A	R	C	R	W	K	E	K	A	L	T	Q	R	G
Query Conservation																		.	.	.
Alig confidence																		.	.	.
Template Conservation
Template Sequence		L	A	N	A	T	A	A	Q	Q	E	V	L	E	A	S	Y	A	M	V	Q	H	I	A	K	G	I	R	I	L	E	A	R	V	A	R	V	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		548	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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