Return to main results Retrieve Phyre Job Id

Job DescriptionP0CE44
Confidence18.60%DateWed Jan 25 15:20:35 GMT 2012
Rank11Aligned Residues67
% Identity13%Templated1f6ga_
SCOP infoVoltage-gated potassium channels Voltage-gated potassium channels Voltage-gated potassium channels
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   390. ........400.........410.........420.........430. ........440.........450...
Predicted Secondary structure 

.










...............
Query SS confidence 

.







































. . . . . . . . . . . . . . .





















Query Sequence  GY. IANQVQTPEVIMGIRTSIALVPCGFMLLAFVIIWFYPLTD. . . . . . . . . . . . . . . KKFKEIVVEIDNRKKVQQQLIS
Query Conservation 
 .             
      
     
             ...............     
  

  
         
Alig confidence 

.







































...............





















Template Conservation 




 
 
   
         
       
  
                                 
     

   
 
Template Sequence  GYGDLYPVTLWGRCVAVVVMVAGITSFGLVTAALATWFVGREQERRGHFVRHSEKAAEEAYTRTTRALHERFDRLERMLD
Template Known Secondary structure 

SS



STTS
S

SSTTS
S
STT
Template Predicted Secondary structure 








Template SS confidence 















































































   77..80.........90.........100.........110.........120.........130.........140.........150......
 
   454..
Predicted Secondary structure 
Query SS confidence 


Query Sequence  DIT
Query Conservation 
  
Alig confidence 


Template Conservation     
Template Sequence  DNR
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 


   157..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions