Return to main results Retrieve Phyre Job Id

Job DescriptionP0CE44
Confidence28.00%DateWed Jan 25 15:20:35 GMT 2012
Rank9Aligned Residues25
% Identity28%Templatec1by0A_
PDB info PDB header:rna binding proteinChain: A: PDB Molecule:protein (hepatitis delta antigen); PDBTitle: n-terminal leucine-repeat region of hepatitis delta antigen
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   431........440.........450.....
Predicted Secondary structure 
Query SS confidence 
























Query Sequence  DKKFKEIVVEIDNRKKVQQQLISDI
Query Conservation        
  

  
         
 
Alig confidence 
























Template Conservation 
























Template Sequence  RKKLEELERDLRKLKKKIKKLEEDN
Template Known Secondary structure 

T


Template Predicted Secondary structure 



Template SS confidence 
























   1........10.........20.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions