 |
Job Description | P45800 | Confidence | 11.31% | Date | Wed Jan 25 15:20:55 GMT 2012 |
Rank | 59 | Aligned Residues | 35 |
% Identity | 23% | Template | c2fl8N_ |
PDB info |
PDB header:virus/viral protein | Chain: N: PDB Molecule:baseplate structural protein gp10; |
PDBTitle: fitting of the gp10 trimer structure into the cryoem map of the2 bacteriophage t4 baseplate in the hexagonal conformation.
|
Resolution | 12.00 Å |
|
  |   |
252 | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | S | L | R | E | I | H | C | L | R | G | T | P | R | R | W | G | L | F | G | E | N | D | Q | E | Q | I | N | N | I | S | L | G | I | I | D | L | V |
Query Conservation |   |
  |   |   |
|   |
|   |
|
|   |
|
|
|
|
|
|   |
|
|
|
|   |
|   |   |
|   |   |   |
|
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
V | R | F | S | D | L | E | L | V | Y | C | A | P | G | R | W | E | Y | V | . |
. |
. |
K | N | K | Q | I | D | K | I | T | S | S | D | I | S | L | Y |
Template Known Secondary structure |   |
| T | T |  |  |  |  |  |
|
|
| B |
| S | S | S |
|
|  | . | . | . |  |
|  |  |  |  |  | S | S |
|
|
|
|
|
|
|
Template Predicted Secondary structure |   |
 |  |  |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |
| . | . | . |
|
|
|  |  |
|
|  |  |
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
128 | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | |
|
|
. | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|