 |
Job Description | P24186 | Confidence | 94.59% | Date | Thu Jan 5 11:41:04 GMT 2012 |
Rank | 413 | Aligned Residues | 71 |
% Identity | 7% | Template | d1j6ua1 |
SCOP info | MurCD N-terminal domain
| MurCD N-terminal domain
| MurCD N-terminal domain
|
Resolution | 2.30 |
|
 |
  |   |
160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | |
. | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
|
|
|  |  | . |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | N | A | V | V | I | G | A | S | N | I | V | G | R | . |
P | M | S | M | E | L | L | L | A | G | C | T | T | T | V | T | H | R | F | T | K | N | L | R | H | H | V | E | N | A | D | L | L | I | V | A | V | G | K | P | G | F | I | P | G | D | W | I | K | E | G | A | I | V | I | D | V | G | I | N | R | L |
Query Conservation |   |
|   |
|   |
|
|
|
|
|   |
|
|
|   | . |
|
|
|   |
|
|   |   |   |   |
|
|
|
|   |   |
|   |   |
|   |   |
|   |   |   |   |   |   |
|
|
|
|
|   |
|
|
|   |   |   |   |
|   |   |   |   |
|
|   |
|
|
|
|
|
|
|
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |
|
|
|   |
|   |
| . |
|   |
|
|
|
|   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |
|   | . | . | . | . |   |   |
|   |
|
|   |
|
|
|
|   |   |   |
Template Sequence |   |
X | K | I | H | F | V | G | I | G | G | I | . |
G | X | S | A | V | A | L | H | E | F | S | N | G | N | D | V | Y | G | S | N | I | E | E | T | E | R | T | A | Y | L | R | K | L | G | I | P | I | F | V | P | H | S | A | D | N | W | Y | . |
. |
. |
. |
D | P | D | L | V | I | K | T | P | A | V | R | D | D |
Template Known Secondary structure |   |
|  |  |  |  |  | T | T | T | S |  | . |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
| S | S |
|
|  |  |  |  |  |  |  |  | T | T |
|
|  |  | S | S |
|
| T | T | S |
|
| . | . | . | . |
|
| S |  |  |  |  |
| T | T |
|
| T | T |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
|
| . |
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|  |  |  |
|
| . | . | . | . |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | |
. | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | |
|
|
|
. | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|