Job Description P24186 Confidence 96.70% Date Thu Jan 5 11:41:04 GMT 2012 Rank 174 Aligned Residues 172 % Identity 14% Template c3updA_ PDB info PDB header:transferase Chain: A: PDB Molecule:ornithine carbamoyltransferase; PDBTitle: 2.9 angstrom crystal structure of ornithine carbamoyltransferase2 (argf) from vibrio vulnificus Resolution 2.91 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.						.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.			.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																			.	.	.	.	.																																							.	.
Query SS confidence																			.	.	.	.	.																																							.	.
Query Sequence		E	V	A	Q	K	V	Q	A	R	I	A	A	G	L	R	A	P	.	.	.	.	.	G	L	A	V	V	L	V	G	S	N	P	A	S	Q	I	Y	V	A	S	K	R	K	A	C	E	E	V	G	F	V	S	R	S	Y	D	L	P	E	.	.	T	T	S	E	A	E	L	L	E	L	I	D	T	L	N	A	D	N
Query Conservation																			.	.	.	.	.																																							.	.
Alig confidence																			.	.	.	.	.															.	.	.																						.	.																		.
Template Conservation																																						.	.	.																																									.
Template Sequence		D	L	S	A	D	L	K	K	A	K	Y	A	G	T	E	Q	K	K	L	L	G	K	N	I	A	L	I	F	E	K	A	S	T	R	T	R	.	.	.	C	A	F	E	V	A	A	F	D	Q	G	A	Q	V	T	Y	I	G	P	S	G	S	Q	I	G	D	K	E	S	M	K	D	T	A	R	V	L	G	R	M	.
Template Known Secondary structure														T					S	S	T	T								S	S							.	.	.										T	T										S	S		T	T	T	S	S													.
Template Predicted Secondary structure																																						.	.	.																																									.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.				.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.											.
Query SS confidence																																																									.											.
Query Sequence		T	I	D	G	I	L	V	Q	L	P	L	P	A	G	I	D	N	V	K	V	L	E	R	I	H	P	D	K	D	V	D	G	F	H	P	Y	N	V	G	R	L	C	Q	R	A	P	R	L	R	P	C	T	P	R	G	.	I	V	T	L	L	E	R	Y	N	I	.	D	T	F	G	L	N	A	V	V	I	G	A	S
Query Conservation																																																									.											.
Alig confidence		.																												.						.	.	.	.	.	.	.	.	.	.	.	.	.									.											.
Template Conservation		.																												.						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	Y	D	G	I	Q	Y	R	G	F	G	Q	A	I	V	E	E	L	G	A	F	A	G	V	P	V	W	N	.	G	L	T	D	E	.	.	.	.	.	.	.	.	.	.	.	.	.	F	H	P	T	Q	I	L	A	D	F	L	T	M	L	E	H	S	Q	G	K	A	L	A	D	I	Q	F	A	Y	L	G	D	A
Template Known Secondary structure		.		S						S	S												S	S	S					.				S	S	.	.	.	.	.	.	.	.	.	.	.	.	.																T	S	S	S			G	G	G							S
Template Predicted Secondary structure		.																												.						.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.														.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
			169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.																										.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure		.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	N	I	V	G	R	P	M	S	M	E	L	L	L	A	G	C	T	T	T	V	T	H	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	T	K	N	L	R	H	H	V	E	N	A	D	L	L	I	V
Query Conservation		.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	N	N	V	G	N	S	L	M	V	G	A	A	K	M	G	M	D	I	R	L	V	G	P	Q	A	Y	W	P	D	E	E	L	V	A	A	C	Q	A	I	A	K	Q	T	G	G	K	I	T	L	T	E	N	V	A	E	G	V	Q	G	C	D	F	L	Y	T
Template Known Secondary structure		S	S													T	T							S		G	G	G	S																	T							S							T	T		S
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions