Job Description P24186 Confidence 97.56% Date Thu Jan 5 11:41:04 GMT 2012 Rank 111 Aligned Residues 185 % Identity 13% Template c3sdsA_ PDB info PDB header:transferase Chain: A: PDB Molecule:ornithine carbamoyltransferase, mitochondrial; PDBTitle: crystal structure of a mitochondrial ornithine carbamoyltransferase2 from coccidioides immitis Resolution 2.80 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.													.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	I	D	G	K	T	I	A	Q	Q	V	R	S	E	V	A	Q	K	V	Q	A	R	I	A	A	G	L	R	A	P	.	.	.	.	.	.	.	.	.	.	.	.	G	L	A	V	V	L	V	G	S	N	P	A	S	Q	I	Y	V	A	S	K	R	K	A	C	E	E	V	G	F	V	S	R	S	Y	D	L	P	E
Query Conservation																																.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.															.	.	.
Template Conservation																																																										.	.	.
Template Sequence		L	L	S	I	A	D	L	T	P	T	E	F	A	T	L	V	R	N	A	S	S	Y	K	K	T	I	K	S	D	S	M	P	E	R	L	T	G	A	L	S	G	K	T	V	A	M	M	F	S	K	R	S	T	R	T	R	.	.	.	V	S	T	E	G	A	V	V	K	M	G	G	H	P	M	F	L	G	K	D	D
Template Known Secondary structure		B	S		G	G	G	S																				T	T	T				G	G	G	T	T	T	T	T	T								S	S							.	.	.										T	T								T	T	T
Template Predicted Secondary structure																																																										.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.				.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.
Predicted Secondary structure																																																																											.
Query SS confidence																																																																											.
Query Sequence		T	T	S	E	A	E	L	L	E	L	I	D	T	L	N	A	D	N	T	I	D	G	I	L	V	Q	L	P	L	P	A	G	I	D	N	V	K	V	L	E	R	I	H	P	D	K	D	V	D	G	F	H	P	Y	N	V	G	R	L	C	Q	R	A	P	R	L	R	P	C	T	P	R	G	.	I	V	T	L	L	E
Query Conservation																																																																											.
Alig confidence																			.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Conservation																			.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	G	V	N	E	S	L	Y	D	T	S	V	V	I	S	S	M	.	.	V	S	C	I	V	A	R	V	G	P	H	S	D	I	A	N	L	A	K	H	S	S	V	P	V	I	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	C	D	T	F	H	P	L	Q	A	I	A	D	F	L	T	I	H	E
Template Known Secondary structure					S	S											T	S	.	.		S							S	S												S	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.				S	S
Template Predicted Secondary structure																			.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.			.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.															.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		152	.	.	.					.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.																												.	.	.	.	.	.	.	200
Predicted Secondary structure						.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	Y	N	I	.	.	.	.	D	T	F	G	L	N	A	V	V	I	G	A	S	N	I	V	G	R	P	M	S	M	E	L	L	L	A	G	C	T	T	T	V	T	H	R	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	K	N	L	R	H	H	V
Query Conservation						.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	F	A	H	P	S	S	L	G	L	E	G	L	K	I	A	W	V	G	D	A	N	N	V	L	F	D	L	A	I	A	A	T	K	M	G	V	N	V	A	V	A	T	P	R	G	Y	E	I	P	S	H	I	V	E	L	I	Q	K	A	R	E	G	V	Q	S	P	G	N	L	T	Q	T	T	V	P	E	V	A	V
Template Known Secondary structure			T			T	T			S		T	T							S																T	T									T	T																T	T		S	S								S						T
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		201	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	A	D	L	L	I	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	D	A	D	V	I	V	T
Template Known Secondary structure		T	T		S
Template Predicted Secondary structure
Template SS confidence
		253	.	.	.	.	.	.	260

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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