Job Description P24186 Confidence 98.50% Date Thu Jan 5 11:41:04 GMT 2012 Rank 64 Aligned Residues 201 % Identity 16% Template c3pwzA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate dehydrogenase 3; PDBTitle: crystal structure of an ael1 enzyme from pseudomonas putida Resolution 1.71 Å

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		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.									.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.																		.
Query SS confidence																																																				.	.	.	.	.	.	.	.																		.
Query Sequence		K	A	C	E	E	V	G	F	V	S	R	S	Y	D	L	P	E	T	T	S	E	A	E	L	L	E	L	I	D	T	L	N	A	D	N	T	I	D	G	I	L	V	Q	L	P	L	P	A	G	I	.	.	.	.	.	.	.	.	D	N	V	K	V	L	E	R	I	H	P	D	K	D	V	D	G	.	F	H	P	Y
Query Conservation																																																				.	.	.	.	.	.	.	.																		.
Alig confidence																		.	.															.																		.	.	.	.	.	.	.	.																		.
Template Conservation																		.	.															.
Template Sequence		L	F	A	Q	A	S	N	Q	Q	L	E	Y	G	A	I	E	.	.	G	S	L	D	D	F	E	A	Q	V	L	Q	F	R	.	S	E	G	G	K	G	M	N	I	T	A	P	F	K	L	R	A	F	E	L	A	D	R	R	S	E	R	A	Q	L	A	R	A	A	N	A	L	K	F	E	D	G	R	I	V	A	E
Template Known Secondary structure							T	T										.	.			T	T	T										.		T	T								T	T										S										T			S						T	T
Template Predicted Secondary structure																		.	.															.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.			.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.		.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure																													.																																.																			.	.
Query SS confidence																													.																																.																			.	.
Query Sequence		N	V	G	R	L	C	Q	R	A	P	R	L	R	P	C	T	P	R	G	I	V	T	L	L	E	R	Y	.	N	I	D	T	F	G	L	N	A	V	V	I	G	A	S	N	I	V	G	R	P	M	S	M	E	L	L	L	A	G	C	.	T	T	T	V	T	H	R	F	T	K	N	L	R	H	H	V	E	N	.	.
Query Conservation																													.																																.																			.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.												.																	.															.																			.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.																													.
Template Sequence		N	F	D	.	.	.	.	.	.	.	.	.	.	.	.	.	G	I	G	L	L	R	D	I	E	E	N	L	G	E	P	L	R	N	R	R	V	L	L	L	G	A	G	G	.	A	V	R	G	A	L	L	P	F	L	Q	A	G	P	S	E	L	V	I	A	N	R	D	M	A	K	A	L	A	L	R	N	E	L	D
Template Known Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.										T	T	S					T	T	S								S		.												T			S							S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.																													.
Template SS confidence
		100	.	.														.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
																		203	.	.	.	.	.	.	210	.						.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	L	L	I	V	A	V	G	.	.	.	.	.	K	P	G	F	I	P	G	D	W	I	K	E	G	A	I	V	I	D	V	G	I	N	R	L	E	N	G	K	V	V	G	D	V	V	F	E	D	A	A	K	R	A	S	Y	I	T	P	V	P	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.																												.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.
Template Sequence		H	S	R	L	R	I	S	R	Y	E	A	L	E	G	Q	S	F	D	I	V	V	N	A	T	S	A	S	L	T	A	D	L	P	P	L	P	A	D	V	L	G	E	A	A	L	A	Y	E	L	A	Y	G	K	G	L	T	P	.	.	.	.	.	.	.	F	L	R	L	A	R	E	Q	G	Q	A	R	L	A	D	G
Template Known Secondary structure			T	T						S	G	G	G	T	T				S						S	S	G	G	G	G	T							G	G	G	G	T	T		S					S	S		S			S			.	.	.	.	.	.	.									S							T
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.								.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	G	P	M	T	V	A	T	L	I	E	N	T	L	Q	A	C	V	E	Y	H	D	P	Q
Query Conservation
Alig confidence		.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	V	G	M	L	V	E	Q	A	A	E	A	F	A	W	W	R	G	V	R
Template Known Secondary structure		.	.	.	.	.	.																	S
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions