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Job DescriptionP24186
Confidence97.43%DateThu Jan 5 11:41:04 GMT 2012
Rank120Aligned Residues119
% Identity21%Templatec3ojlA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:cap5o; PDBTitle: native structure of the udp-n-acetyl-mannosamine dehydrogenase cap5o2 from staphylococcus aureus
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   161........170.........180.........190......... 200.........210
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Query Sequence  NAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHH. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . VENADLLIVAV
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Template Sequence  KLTVVGLGY. IGLPTSIMFAKHGVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVSTTPEASDVFIIAV
Template Known Secondary structure 

ST.TTT

S
TT

SS

TTTTSSS



S

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   2.......10 .........20.........30.........40.........50.........60.........70.........80
 
   211....... .220.........230........
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Query Sequence  GKPGFIPG. . . . . . . . . . . . . . . . . DWIKEGAIVIDVGINRLENG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  PTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVESTIAPKTMDDFVKPVIENLGFTIGEDIYLVHCPERVLPGKILE
Template Known Secondary structure 


B
SSTT

B

GGG

TT

S


TTTTTT

BTTTB





SS
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   81........90.........100.........110.........120.........130.........140.........150.........160
 
   239240.........250.........260... ......270.........280
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Query Sequence  . . . . . . KVVGDVVFEDAAKRASYITPVPGGV. . . . . . GPMTVATLIENTLQACV
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Template Sequence  ELVHNNRIIGGVTKACIEAGKRVYRTFVQGEMIETDARTAEMSKLMENTYRDVN
Template Known Secondary structure  S
SSTTT

S
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   161........170.........180.........190.........200.........210....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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