Job Description P24186 Confidence 98.81% Date Thu Jan 5 11:41:04 GMT 2012 Rank 35 Aligned Residues 224 % Identity 18% Template c3n7uD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:formate dehydrogenase; PDBTitle: nad-dependent formate dehydrogenase from higher-plant arabidopsis2 thaliana in complex with nad and azide Resolution 2.00 Å

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		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.										.	.	120	.	.	.	.	.
Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.	.	.	.	.
Query Sequence		R	K	A	C	E	E	V	G	F	V	S	R	S	Y	D	L	P	E	T	T	S	E	A	E	L	L	E	L	I	D	T	L	N	A	D	N	T	I	D	G	I	L	V	Q	L	P	L	P	A	G	I	D	N	V	K	V	L	E	R	I	H	P	D	.	.	.	.	.	.	.	.	.	K	D	V	D	G	F	H	P
Query Conservation																																																																	.	.	.	.	.	.	.	.	.
Alig confidence																					.												.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.
Template Conservation																					.												.	.	.	.	.	.
Template Sequence		R	D	W	L	E	S	Q	G	H	Q	Y	I	V	T	D	D	K	E	G	.	P	D	C	E	L	E	K	H	I	P	D	.	.	.	.	.	.	L	H	V	L	I	S	T	P	F	H	P	A	Y	V	T	A	E	R	I	K	K	A	K	N	L	K	L	L	L	T	A	G	I	G	S	D	H	I	D	L	Q	A	A
Template Known Secondary structure								T	T							S			S	S	.	T	T	S						T	T	T	.	.	.	.	.	.		S						T	T	S				B									T	T							S	S	S			T	T	B
Template Predicted Secondary structure																					.												.	.	.	.	.	.
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.	.							90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
		126	.	.	.		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150																									.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure						.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	N	V	G	.	R	L	C	Q	R	A	P	R	L	R	P	C	T	P	R	G	I	V	T	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	R	Y	N	I	D	T	F	G	L	N	A	V	V	I	G	A	S	N	I	V	G	R	P	M	S	M	E	L	L
Query Conservation						.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Conservation																																																																							.
Template Sequence		A	A	A	G	L	T	V	A	E	V	T	G	S	N	V	V	S	V	A	E	D	E	L	M	R	I	L	I	L	M	R	N	F	V	P	G	Y	N	Q	V	V	K	G	E	W	N	V	A	G	I	A	Y	R	A	Y	D	L	E	G	K	T	I	G	T	V	G	A	G	R	.	I	G	K	L	L	L	Q	R	L	K
Template Known Secondary structure					T							T	T	S	S																	T	T										T	T				T					T	T				S	T	T									S		.										G
Template Predicted Secondary structure																																																																							.
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.															.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.					.	.	.	.	.	.				.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.							.	.	.																				.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.							.	.	.																				.	.
Query Sequence		L	A	G	C	T	T	T	V	T	H	R	F	T	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	L	R	H	H	V	E	N	A	D	L	L	I	V	A	V	G	K	.	.	.	.	P	G	F	I	P	G	.	.	.	D	W	I	K	E	G	A	I	V	I	D	V	G	I	N	R	L	E	N	.	.
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.							.	.	.																				.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.							.	.	.																				.	.
Template Conservation
Template Sequence		P	F	G	C	N	L	L	Y	H	D	R	L	Q	M	A	P	E	L	E	K	E	T	G	A	K	F	V	E	D	L	N	E	M	L	P	K	C	D	V	I	V	I	N	M	P	L	T	E	K	T	R	G	M	F	N	K	E	L	I	G	K	L	K	K	G	V	L	I	V	N	N	A	R	G	A	I	M	E	R	Q
Template Known Secondary structure		G	G									S	S											T					S	S					G	G	G		S						S				T	T	T	T	T		B							T	S		T	T							S		G	G	G	B
Template Predicted Secondary structure
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
										238	.	240	.	.												.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	G	K	V	V	G	.	.	.	.	.	.	.	.	.	.	.	D	V	V	F	E	D	A	A	K	R	A	S	Y	I	T	P	V	P	G	G	V	G	P	M	T	V	A	T	L	I	E	N	T	L	Q	A	C	V	E	Y	H	D	P	Q
Query Conservation		.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	V	V	D	A	V	E	S	G	H	I	G	G	Y	S	G	D	V	W	D	P	Q	P	A	P	K	D	H	P	W	R	Y	M	P	N	Q	A	M	T	P	H	T	S	G	T	T	I	D	A	Q	L	R	Y	A	A	G	T	K	D	M	L	E	R	Y	F	K	G	E
Template Known Secondary structure										T	S							S			S	S	S	S			T	T		G	G	G	T	S	T	T					S	S		G	G	G	S																				T	T
Template Predicted Secondary structure
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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