Job Description P24186 Confidence 97.12% Date Thu Jan 5 11:41:04 GMT 2012 Rank 143 Aligned Residues 179 % Identity 13% Template c3grfA_ PDB info PDB header:transferase Chain: A: PDB Molecule:ornithine carbamoyltransferase; PDBTitle: x-ray structure of ornithine transcarbamoylase from giardia2 lamblia Resolution 2.00 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.						.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.
Query SS confidence																																		.	.	.	.	.
Query Sequence		I	I	D	G	K	T	I	A	Q	Q	V	R	S	E	V	A	Q	K	V	Q	A	R	I	A	A	G	L	R	A	P	G	L	.	.	.	.	.	A	V	V	L	V	G	S	N	P	A	S	Q	I	Y	V	A	S	K	R	K	A	C	E	E	V	G	F	V	S	R	S	Y	D	L	P	E	T	T	S	E	A	E	L
Query Conservation																																		.	.	.	.	.
Alig confidence																																		.	.	.	.	.								.	.																									.	.	.	.	.	.	.
Template Conservation																																														.	.																									.	.	.	.	.	.	.
Template Sequence		L	L	T	I	S	A	L	C	P	K	E	L	A	Y	L	I	D	R	A	L	D	M	K	K	N	P	A	K	Y	T	A	R	A	A	N	K	T	L	L	A	F	F	A	K	.	.	P	S	L	R	T	R	V	S	L	E	T	A	M	T	R	L	G	G	H	A	I	Y	Y	E	.	.	.	.	.	.	.	L	T	V
Template Known Secondary structure		B	S	S	G	G	G	S																			G	G	G	G	T	T	T	T	T	T								S	S	.	.																	T								.	.	.	.	.	.	.
Template Predicted Secondary structure																																														.	.																									.	.	.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.			.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.								.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.
Predicted Secondary structure																																																																				.										.	.	.	.
Query SS confidence																																																																				.										.	.	.	.
Query Sequence		L	E	L	I	D	T	L	N	A	D	N	T	I	D	G	I	L	V	Q	L	P	L	P	A	G	I	D	N	V	K	V	L	E	R	I	H	P	D	K	D	V	D	G	F	H	P	Y	N	V	G	R	L	C	Q	R	A	P	R	L	R	P	C	T	P	R	G	.	I	V	T	L	L	E	R	Y	N	.	.	.	.
Query Conservation																																																																				.										.	.	.	.
Alig confidence												.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.														.										.	.	.	.
Template Conservation												.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	D	T	A	E	V	F	S	R	M	.	.	V	D	I	C	T	A	R	L	A	T	K	E	M	M	R	E	M	A	Q	H	A	S	V	P	C	I	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	D	D	F	G	H	P	L	Q	M	V	C	D	F	M	T	I	K	E	K	F	T	A	A	G	E
Template Known Secondary structure									T	T	T	.	.		S							S	S												S	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S		S	S																				T	T
Template Predicted Secondary structure												.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.			100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.															.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
				155	.	.	.	.	160	.	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.																														.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure		.	.															.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.															.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	I	D	T	F	G	L	N	A	V	V	I	G	A	S	.	N	I	V	G	R	P	M	S	M	E	L	L	L	A	G	C	T	T	T	V	T	H	R	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	K	N	L	R	H	H	V	E	N
Query Conservation		.	.															.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.															.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	S	N	G	F	K	G	I	K	F	A	Y	C	G	D	S	M	N	N	V	T	Y	D	L	M	R	G	C	A	L	L	G	M	E	C	H	V	C	C	P	D	H	K	D	F	K	P	I	K	E	V	I	D	E	C	E	E	I	I	A	K	H	G	T	G	G	S	I	K	I	F	H	D	C	K	K	G	C	E	G
Template Known Secondary structure			T	T	T	G	G	G							S			S	S														T									S	S	G	G	G	S																	T									S	S						T	T
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		203	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	L	L	I	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	D	V	V	Y	T
Template Known Secondary structure			S
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions