Job Description P24186 Confidence 97.68% Date Thu Jan 5 11:41:04 GMT 2012 Rank 109 Aligned Residues 180 % Identity 14% Template c3gd5D_ PDB info PDB header:transferase Chain: D: PDB Molecule:ornithine carbamoyltransferase; PDBTitle: crystal structure of ornithine carbamoyltransferase from gloeobacter2 violaceus Resolution 2.10 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.					.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.
Query SS confidence																																	.	.	.	.
Query Sequence		M	A	A	K	I	I	D	G	K	T	I	A	Q	Q	V	R	S	E	V	A	Q	K	V	Q	A	R	I	A	A	G	L	.	.	.	.	R	A	P	G	L	A	V	V	L	V	G	S	N	P	A	S	Q	I	Y	V	A	S	K	R	K	A	C	E	E	V	G	F	V	S	R	S	Y	D	L	P	E	T	T	S	E
Query Conservation																																	.	.	.	.
Alig confidence																																	.	.	.	.																		.	.	.																		.	.	.	.	.	.	.	.
Template Conservation																																																						.	.	.																		.	.	.	.	.	.	.	.
Template Sequence		F	R	P	D	L	L	S	L	D	D	L	D	E	A	Q	L	H	A	L	L	T	L	A	H	Q	L	K	R	G	E	R	V	A	N	L	H	G	K	V	L	G	L	V	F	L	K	A	S	T	R	T	R	.	.	.	V	S	F	T	V	A	M	Y	Q	L	G	G	Q	V	I	D	L	.	.	.	.	.	.	.	.
Template Known Secondary structure				S		B	S	S	G	G	G	S																	T	T	S	S					T	T								S	S							.	.	.										T	T							.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																						.	.	.																		.	.	.	.	.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.				.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																																																																							.
Query SS confidence																																																																							.
Query Sequence		A	E	L	L	E	L	I	D	T	L	N	A	D	N	T	I	D	G	I	L	V	Q	L	P	L	P	A	G	I	D	N	V	K	V	L	E	R	I	H	P	D	K	D	V	D	G	F	H	P	Y	N	V	G	R	L	C	Q	R	A	P	R	L	R	P	C	T	P	R	G	.	I	V	T	L	L	E	R	Y	N	I
Query Conservation																																																																							.
Alig confidence															.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.														.										.
Template Conservation															.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Sequence		E	P	V	R	D	T	A	R	V	L	G	R	Y	.	.	V	D	G	L	A	I	R	T	F	A	Q	T	E	L	E	E	Y	A	H	Y	A	G	I	P	V	I	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	T	D	H	E	H	P	C	Q	V	V	A	D	L	L	T	I	R	E	N	F	G	.
Template Known Secondary structure												T	T	T	.	.		S							S	S												S	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.				S	S																		S	.
Template Predicted Secondary structure															.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.			.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130															.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.																										.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	T	F	G	L	N	A	V	V	I	G	A	S	N	I	V	G	R	P	M	S	M	E	L	L	L	A	G	C	T	T	T	V	T	H	R	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	K	N	L	R	H	H	V	E	N	A	D	L	L	I	V
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	L	A	G	L	K	L	A	Y	V	G	D	G	N	N	V	A	H	S	L	L	L	G	C	A	K	V	G	M	S	I	A	V	A	T	P	E	G	F	T	P	D	P	A	V	S	A	R	A	S	E	I	A	G	R	T	G	A	E	V	Q	I	L	R	D	P	F	E	A	A	R	G	A	H	I	L	Y	T
Template Known Secondary structure				T	T							S																T	T									T	T																			T							S							T	T		S
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions