Return to main results Retrieve Phyre Job Id

Job DescriptionP24186
Confidence96.44%DateThu Jan 5 11:41:04 GMT 2012
Rank196Aligned Residues71
% Identity21%Templatec3ckyA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:2-hydroxymethyl glutarate dehydrogenase; PDBTitle: structural and kinetic properties of a beta-hydroxyacid dehydrogenase2 involved in nicotinate fermentation
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   161........170.........180.........190.. .......200.........210.........220
Predicted Secondary structure 










..............













......
Query SS confidence 































. . . . . . . . . . . . . .



























. . . . . .
Query Sequence  NAVVIGASNIVGRPMSMELLLAGCTTTVTHRF. . . . . . . . . . . . . . TKNLRHHVENADLLIVAVGKPGFIPGDW. . . . . .
Query Conservation   
 




 


 


 

    



  
  ..............
  
      




 


    
    ......
Alig confidence 








.





















..............



























......
Template Conservation 

 


 
 .

  

  
   
  
   
        
   
     
  
    

 
 
 
                
Template Sequence  KIGFIGLGA. MGKPMAINLLKEGVTVYAFDLMEANVAAVVAQGAQACENNQKVAAASDIIFTSLPNAGIVETVMNGPGGV
Template Known Secondary structure 


T.TTT

SSTTT

SS
S

SSSTT
Template Predicted Secondary structure 


.
















Template SS confidence 















































































   6...10.... .....20.........30.........40.........50.........60.........70.........80....
 
   221........230..
Predicted Secondary structure  ...







Query SS confidence  . . .











Query Sequence  . . . IKEGAIVIDVGI
Query Conservation  ...

 








Alig confidence  ...











Template Conservation           
   

Template Sequence  LSACKAGTVIVDMSS
Template Known Secondary structure  S
TT



Template Predicted Secondary structure 







Template SS confidence 














   85....90.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions