 |
Job Description | P24186 | Confidence | 94.86% | Date | Thu Jan 5 11:41:04 GMT 2012 |
Rank | 388 | Aligned Residues | 71 |
% Identity | 23% | Template | c2yv3B_ |
PDB info |
PDB header:oxidoreductase | Chain: B: PDB Molecule:aspartate-semialdehyde dehydrogenase; |
PDBTitle: crystal structure of aspartate semialdehyde dehydrogenase from thermus2 thermophilus hb8
|
Resolution | 2.70 Å |
|
 |
  |   |
161 | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | |
|
|
. | . | . | . | . | . | 190 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | |
|
. | . | . | . | 220 |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
| . | . | . |
|  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|
|
|
| . | . |
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
Query Sequence |   |
N | A | V | V | I | G | A | S | N | I | V | G | R | P | M | S | M | E | L | L | L | A | G | . |
. |
. |
C | T | T | T | V | T | H | R | F | T | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
K | N | L | R | H | H | V | E | N | A | D | L | L | I | V | A | V | G | K | P | G | F | . |
. |
I | P | G | D | W |
Query Conservation |   |
  |
|   |
|
|
|
|
|   |
|
|
|   |
|
|
|   |
|
|   |   |   |   | . | . | . |
|
|
|
|   |   |
|   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |
|   |   |   |   |   |   |
|
|
|
|
|   |
|
|
|   |   |   |   | . | . |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
Template Conservation |   |
  |
|   |
|
|
|
|
|
|   |   |
|   |
|
|
|
|
|
|   |   |   |   |   |
|   |   |   |
|   |   |   |   |
|   |   |   |   |
|
|   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |
Template Sequence |   |
R | V | A | V | V | G | A | T | G | A | V | G | R | E | I | L | K | V | L | E | A | R | N | F | P | L | S | E | L | R | L | Y | A | S | P | R | S | A | G | V | R | L | A | F | R | G | E | E | I | P | V | E | P | L | P | E | G | P | L | P | V | D | L | V | L | A | S | A | G | G | G | I | S | R | A | K | A | L | V | W |
Template Known Secondary structure |   |
 |  |  |  |  | T | T | T | S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|
|  |  |  |  |  |  |
| G | G | G | S | S |
|  |  |  |  | T | T |  |  |  |  |  |  |  |
|
| S | S |
|
| S |
| S |  |  |  |  |
| S |
| S |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
  |
  |   |
221 | . | . | . | . | . | . | . | . | 230 | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | K | E | G | A | I | V | I | D | V | G |
Query Conservation |   |
|
|   |
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |
|
|
|
|
|
Template Sequence |   |
A | E | G | G | A | L | V | V | D | N | S |
Template Known Secondary structure |   |
 |  | T | T |
|  |  |  |  |
| S |
Template Predicted Secondary structure |   |
 |  |
|
|
|  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|