Job Description P24186 Confidence 98.27% Date Thu Jan 5 11:41:04 GMT 2012 Rank 91 Aligned Residues 128 % Identity 18% Template c2w2kB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:d-mandelate dehydrogenase; PDBTitle: crystal structure of the apo forms of rhodotorula graminis2 d-mandelate dehydrogenase at 1.8a. Resolution 1.85 Å

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		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.															.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.					.	.
Predicted Secondary structure																									.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Query SS confidence																									.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Query Sequence		N	I	D	T	F	G	L	N	A	V	V	I	G	A	S	N	I	V	G	R	P	M	S	.	M	E	L	L	L	A	G	C	T	T	T	V	T	H	R	F	T	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	L	R	H	H	V	E	N	A	D	L	L	I	V	A	V	G	K	.	.	.	.	P	G
Query Conservation																									.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Alig confidence																		.							.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Template Conservation																		.
Template Sequence		A	H	N	P	R	G	H	V	L	G	A	V	G	L	G	A	.	I	Q	K	E	I	A	R	K	A	V	H	G	L	G	M	K	L	V	Y	Y	D	V	A	P	A	D	A	E	T	E	K	A	L	G	A	E	R	V	D	S	L	E	E	L	A	R	R	S	D	C	V	S	V	S	V	P	Y	M	K	L	T	H	H
Template Known Secondary structure					S	T	T	S								S		.												T	T									S	S											T					S	S									S									S	G	G	G	T	T
Template Predicted Secondary structure																		.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.		.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		215	.	.	.				.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.											.	.	240	.	.	.											.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure						.	.	.																				.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.																				.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.
Query Sequence		F	I	P	G	.	.	.	D	W	I	K	E	G	A	I	V	I	D	V	G	I	N	R	L	E	N	.	.	.	.	.	.	.	.	.	.	G	K	V	V	G	D	.	.	.	.	.	.	.	.	.	.	V	V	F	E	D	A	A	K	R	A	S	Y	I	T	P	V	P	G	G	V	G	P	M	T	V	A	T	L
Query Conservation						.	.	.																				.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.																				.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	I	D	E	A	F	F	A	A	M	K	P	G	S	R	I	V	N	T	A	R	G	P	V	I	S	Q	D	A	L	I	A	A	L	K	S	G	K	L	L	S	A	G	L	D	V	H	E	F	E	P	N	V	S	K	E	L	I	E	M	K	H	V	T	L	T	T	H	I	G	G	V	A	I	E	T	F	H	E	F
Template Known Secondary structure			B								S		T	T							S		G	G	G	B											T	T	S							S	S		T	T	T	T	S							T	S	S	S					S	S		T	T		S
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
		272	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	N	T	L	Q	A	C	V	E	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	R	L	T	M	T	N	I	D	R	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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