Job Description P24186 Confidence 94.83% Date Thu Jan 5 11:41:04 GMT 2012 Rank 393 Aligned Residues 135 % Identity 16% Template c2qrlA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:saccharopine dehydrogenase, nad+, l-lysine- PDBTitle: crystal structure of oxalylglycine-bound saccharopine2 dehydrogenase (l-lys forming) from saccharomyces cerevisiae Resolution 1.60 Å

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		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.				.	.	.	.	.	.	190	.	.	.	.				.	.	.	.	.	200	.	.	.	.	.	.	.	.	.					210	.	.	.	.
Predicted Secondary structure																																									.	.	.												.	.	.																.	.	.	.
Query SS confidence																																									.	.	.												.	.	.																.	.	.	.
Query Sequence		G	I	V	T	L	L	E	R	Y	N	I	D	T	F	G	L	N	A	V	V	I	G	A	S	N	I	V	G	R	P	M	S	M	E	L	L	L	A	G	.	.	.	C	T	T	T	V	T	H	R	F	T	K	.	.	.	N	L	R	H	H	V	E	N	A	D	L	L	I	V	A	.	.	.	.	V	G	K	P	G
Query Conservation																																									.	.	.												.	.	.																.	.	.	.
Alig confidence																																									.	.	.												.	.	.																.	.	.	.
Template Conservation
Template Sequence		V	T	K	D	Y	K	E	A	L	A	T	G	A	R	K	P	T	V	L	I	I	G	A	L	G	R	C	G	S	G	A	I	D	L	L	H	K	V	G	I	P	D	A	N	I	L	K	W	D	I	K	E	T	S	R	G	G	P	F	D	E	I	P	Q	A	D	I	F	I	N	C	I	Y	L	S	K	P	I	A	P
Template Known Secondary structure												T	T										T	T	T	S														T			G	G	G										T	T		S			T					S	S										S	S
Template Predicted Secondary structure
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		215	.	.	.	.	220	.					.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.																	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure									.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	I	P	G	D	W	I	.	.	.	.	K	E	G	A	I	V	I	D	V	G	I	N	R	L	E	N	G	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	V	G	D	V	V	F	E	D	A	A	K	R	A	S	Y	I	T	P	V	P	G	G	V	G	P	M	T	V	A	T	L	I	E	N
Query Conservation									.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Template Conservation																																																																		.	.	.
Template Sequence		F	T	N	M	E	K	L	N	N	P	N	R	R	L	R	T	V	V	D	V	S	A	D	T	T	N	P	H	N	P	I	P	I	Y	T	V	A	T	V	F	N	K	P	T	V	L	V	P	T	T	A	G	P	K	L	S	V	I	S	I	D	H	L	P	.	.	.	S	L	L	P	R	E	A	S	E	F	F	S	H
Template Known Secondary structure		S									T	T									T	T			T	T		S	S		S	S		S						B	T	T	B								S	S	S	S								T	T	G	G	.	.	.	G	G	S
Template Predicted Secondary structure																																																																		.	.	.
Template SS confidence
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.				.	.	.	.	.	.	.	330	.	.	.	.	.
		275	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	Q	A	C	V	E	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L	L	P	S	L	E	L
Template Known Secondary structure								T	T
Template Predicted Secondary structure
Template SS confidence
		336	.	.	.	340	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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