Job Description P24186 Confidence 98.35% Date Thu Jan 5 11:41:04 GMT 2012 Rank 87 Aligned Residues 134 % Identity 13% Template c2omeA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:c-terminal-binding protein 2; PDBTitle: crystal structure of human ctbp2 dehydrogenase complexed with nad(h) Resolution 2.80 Å

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		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.														.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.					.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Query Sequence		R	Y	N	I	D	T	F	G	L	N	A	V	V	I	G	A	S	N	I	V	G	R	P	M	S	M	E	L	L	L	A	G	C	T	T	T	V	T	H	R	F	T	K	.	.	.	.	.	.	.	.	.	.	.	.	.	N	L	R	H	H	V	E	N	A	D	L	L	I	V	A	V	G	K	.	.	.	.	P	G
Query Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Alig confidence																				.																									.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Template Conservation																				.
Template Sequence		S	G	A	A	R	I	R	G	E	T	L	G	L	I	G	F	G	R	.	T	G	Q	A	V	A	V	R	A	K	A	F	G	F	S	V	I	F	Y	D	P	Y	L	Q	D	G	I	E	R	S	L	G	V	Q	R	V	Y	T	L	Q	D	L	L	Y	Q	S	D	C	V	S	L	H	C	N	L	N	E	H	N	H	H
Template Known Secondary structure		T	T					T	T									S		.										G	G	G	T								T	T	S		T	T					T	T					S	S									S										T	T		T	T
Template Predicted Secondary structure																				.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		215	.	.	.	.	220	.	.				.	.	.	.	.	.	.	230	.	.	.	.	.	.	.											.	.	240	.	.													.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.																.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.																.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	I	P	G	D	W	I	K	.	.	.	E	G	A	I	V	I	D	V	G	I	N	R	L	E	N	.	.	.	.	.	.	.	.	.	.	G	K	V	V	G	.	.	.	.	.	.	.	.	.	.	.	.	D	V	V	F	E	D	A	A	K	R	A	S	Y	I	T	P	V	P	G	G	V	G	P	M	T	V	A
Query Conservation										.	.	.																.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.																.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	I	N	D	F	T	I	K	Q	M	R	Q	G	A	F	L	V	N	A	A	R	G	G	L	V	D	E	K	A	L	A	Q	A	L	K	E	G	R	I	R	G	A	A	L	D	V	H	E	S	E	P	F	S	F	A	Q	G	P	L	K	D	A	P	N	L	I	C	T	P	H	T	A	W	Y	S	E	Q	A	S	L
Template Known Secondary structure		S	B						T	T	S		T	T							S		G	G	G	B											T	T	S							S			S	S	S	S			T	T	S	S	T	T	T	T		S	S					S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	I	E	N	T	L	Q	A	C	V	E	Y	H	D	P	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	M	R	E	A	A	A	T	E	I	R	R	A	I	T	G	R
Template Known Secondary structure																	S
Template Predicted Secondary structure
Template SS confidence
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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