Job Description P24186 Confidence 97.29% Date Thu Jan 5 11:41:04 GMT 2012 Rank 128 Aligned Residues 167 % Identity 13% Template c2o3jC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:udp-glucose 6-dehydrogenase; PDBTitle: structure of caenorhabditis elegans udp-glucose dehydrogenase Resolution 1.88 Å

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		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.		.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure																																															.									.
Query SS confidence																																															.									.
Query Sequence		Q	I	Y	V	A	S	K	R	K	A	C	E	E	V	G	F	V	S	R	S	Y	D	L	P	E	T	T	S	E	A	E	L	L	E	L	I	D	T	L	N	A	D	N	T	I	.	D	G	I	L	V	Q	L	P	.	L	P	A	G	I	D	N	V	K	V	L	E	R	I	H	P	D	K	D	V	D	G	F	H	P
Query Conservation																																															.									.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.																.									.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	S	S	I	N	S	I	S	A	V	C	E	A	T	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	I	S	E	V	A	H	A	V	G	Y	D	T	R	I	G	S	K	F	L	Q	A	S	V	G	F	G	G	S	C	F	Q	K	D	V	L	S	L	V	Y	L	C	E	S	L	N	L	P	Q	V
Template Known Secondary structure																T		.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	S	T	T	T		S	T	T					S				S	S	S															T	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.															.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.										.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.																									.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.																									.	.	.	.
Query Sequence		Y	N	V	G	R	L	C	Q	R	A	P	R	L	R	P	C	T	P	R	G	I	V	T	L	L	E	R	Y	N	I	D	T	F	G	L	N	A	V	V	I	G	A	S	.	.	.	.	.	.	.	.	.	N	I	V	G	R	P	M	S	M	E	L	L	L	A	G	C	T	T	T	V	T	H	R	F	.	.	.	.
Query Conservation																																													.	.	.	.	.	.	.	.	.																									.	.	.	.
Alig confidence																.	.																												.	.	.	.	.	.	.	.	.																									.	.	.	.
Template Conservation																.	.
Template Sequence		A	D	Y	W	Q	G	V	I	N	I	N	N	W	Q	.	.	R	R	R	F	A	D	K	I	I	A	E	L	F	N	T	V	T	D	K	K	I	A	I	F	G	F	A	F	K	K	N	T	G	D	T	R	E	S	S	A	I	H	V	I	K	H	L	M	E	E	H	A	K	L	S	V	Y	D	P	K	V	Q	K	S
Template Known Secondary structure																.	.												T	T	T			T	T									S	S	S	S	S					T	T												T	T	T								S	S	S
Template Predicted Secondary structure																.	.
Template SS confidence
		304	.	.	.	.	.	310	.	.	.	.	.	.	.			.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
																							193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220							.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	K	N	L	R	H	H	V	E	N	A	D	L	L	I	V	A	V	G	K	P	G	F	I	P	G	D	W	.	.	.	.	.	.	I	K	E	G	A	I	V	I	D	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.
Template Conservation
Template Sequence		Q	M	L	N	D	L	A	S	V	T	S	A	Q	D	V	E	R	L	I	T	V	E	S	D	P	Y	A	A	A	R	G	A	H	A	I	V	V	L	T	E	W	D	E	F	V	E	L	N	Y	S	Q	I	H	N	D	M	Q	H	P	A	A	I	F	D	G
Template Known Secondary structure											S													S							T	T		S						S			G	G	G	T	T	S								T	S		S	S						S
Template Predicted Secondary structure
Template SS confidence
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions