Job Description P24186 Confidence 98.87% Date Thu Jan 5 11:41:04 GMT 2012 Rank 30 Aligned Residues 222 % Identity 20% Template c2j6iC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:formate dehydrogenase; PDBTitle: candida boidinii formate dehydrogenase (fdh) c-terminal2 mutant Resolution 1.55 Å

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		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.								.	120	.	.	.	.	.	.	.
Predicted Secondary structure																																																																		.	.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.	.
Query Sequence		R	K	A	C	E	E	V	G	F	V	S	R	S	Y	D	L	P	E	T	T	S	E	A	E	L	L	E	L	I	D	T	L	N	A	D	N	T	I	D	G	I	L	V	Q	L	P	L	P	A	G	I	D	N	V	K	V	L	E	R	I	H	P	D	K	.	.	.	.	.	.	.	D	V	D	G	F	H	P	Y	N
Query Conservation																																																																		.	.	.	.	.	.	.
Alig confidence													.	.																			.	.	.	.	.	.																							.					.	.	.	.	.	.	.
Template Conservation													.	.																			.	.	.	.	.	.																							.
Template Sequence		A	N	W	L	K	D	Q	G	H	E	L	.	.	I	T	T	S	D	K	E	G	N	S	V	L	D	Q	H	I	P	D	.	.	.	.	.	.	A	D	I	I	I	T	T	P	F	H	P	A	Y	I	T	K	E	R	I	D	K	A	.	K	K	L	K	L	V	V	V	A	G	V	G	S	D	H	I	D	L	D	Y
Template Known Secondary structure								T	T				.	.				S												G	G	G	.	.	.	.	.	.		S						T	T	S				B									.	T	T							S	S	S			T	T	B
Template Predicted Secondary structure													.	.																			.	.	.	.	.	.																							.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.			.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.							60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.		.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		128	.	130	.							.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150																									.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	G	R	L	.	.	.	.	.	.	C	Q	R	A	P	R	L	R	P	C	T	P	R	G	I	V	T	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	R	Y	N	I	D	T	F	G	L	N	A	V	V	I	G	A	S	N	I	V	G	R	P	M	S	M
Query Conservation						.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Conservation																																																																										.
Template Sequence		I	N	Q	T	G	K	K	I	S	V	L	E	V	T	G	S	N	V	V	S	V	A	E	H	V	V	M	T	M	L	V	L	V	R	N	F	V	P	A	H	E	Q	I	I	N	H	D	W	E	V	A	A	I	A	K	D	A	Y	D	I	E	G	K	T	I	A	T	I	G	A	G	R	.	I	G	Y	R	V	L	E
Template Known Secondary structure						T									T	T	S	S																	T	T										T	T									T	T				S	T	T									S		.
Template Predicted Secondary structure																																																																										.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.		.	.	.	.	.	180	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.																.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.					.	.	.	.	.	.	.	220	.	.				.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.											.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.											.	.	.
Query Sequence		E	L	L	L	A	G	C	T	T	T	V	T	H	R	F	T	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	L	R	H	H	V	E	N	A	D	L	L	I	V	A	V	G	K	.	.	.	.	P	G	F	I	P	G	D	W	I	K	.	.	.	E	G	A	I	V	I	D	V	G	I	N	R	L
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.											.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.											.	.	.
Template Conservation
Template Sequence		R	L	V	P	F	N	P	K	E	L	L	Y	Y	D	Y	Q	A	L	P	K	D	A	E	E	K	V	G	A	R	R	V	E	N	I	E	E	L	V	A	Q	A	D	I	V	T	V	N	A	P	L	H	A	G	T	K	G	L	I	N	K	E	L	L	S	K	F	K	K	G	A	W	L	V	N	T	A	R	G	A	I
Template Known Secondary structure				G	G	G			S							S	S											T					S	S									S									S	T	T	T	T	T		B						T	T	S		T	T							S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		236	.											.	.	240	.	.				.	.														.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.						.	.	.			.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.						.	.	.			.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	N	.	.	.	.	.	.	.	.	.	.	G	K	V	V	G	.	.	.	D	V	.	.	.	.	.	.	.	.	.	.	.	.	.	V	F	E	D	A	A	K	R	A	S	Y	I	T	P	V	P	G	G	V	G	P	M	T	V	A	T	L	I	E	N	T	L	Q	A	C	V	E	Y	H	D	P	Q
Query Conservation				.	.	.	.	.	.	.	.	.	.						.	.	.			.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.						.	.	.			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		C	V	A	E	D	V	A	A	A	L	E	S	G	Q	L	R	G	Y	G	G	D	V	W	F	P	Q	P	A	P	K	D	H	P	W	R	D	M	R	N	K	Y	G	A	G	N	A	M	T	P	H	Y	S	G	T	T	L	D	A	Q	T	R	Y	A	Q	G	T	V	N	I	L	E	S	F	F	T	G	K
Template Known Secondary structure		B												T	S							S			S	S	S	S			T	T									T	T	S								S		G	G	G	S																				T	S
Template Predicted Secondary structure
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions