Job Description P24186 Confidence 98.95% Date Thu Jan 5 11:41:04 GMT 2012 Rank 28 Aligned Residues 222 % Identity 20% Template c2eklA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:d-3-phosphoglycerate dehydrogenase; PDBTitle: structure of st1218 protein from sulfolobus tokodaii Resolution 1.77 Å

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		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.					.	.	.	.	.	.
Predicted Secondary structure																																																																								.	.	.	.
Query SS confidence																																																																								.	.	.	.
Query Sequence		A	S	K	R	K	A	C	E	E	V	G	F	V	S	R	S	Y	D	L	P	E	T	T	S	E	A	E	L	L	E	L	I	D	T	L	N	A	D	N	T	I	D	G	I	L	V	Q	L	P	L	P	A	G	I	D	N	V	K	V	L	E	R	I	H	P	D	K	D	V	D	.	.	.	.	G	F	H	P	Y	N
Query Conservation																																																																								.	.	.	.
Alig confidence																			.	.	.															.	.	.	.	.	.														.	.	.															.	.	.	.
Template Conservation																			.	.	.															.	.	.	.	.	.														.	.	.
Template Sequence		E	I	L	I	K	T	L	R	E	K	G	I	Q	V	D	Y	M	.	.	.	P	E	I	S	K	E	E	L	L	N	I	I	G	N	.	.	.	.	.	.	Y	D	I	I	V	V	R	S	R	T	K	V	T	.	.	.	K	D	V	I	E	K	G	K	K	L	K	I	I	A	R	A	G	I	G	L	D	N	I	D
Template Known Secondary structure											T	T							.	.	.	T	T										G	G	G	.	.	.	.	.	.		S						S	S	S		B		.	.	.								T	T								S	S			T	T	B
Template Predicted Secondary structure																			.	.	.															.	.	.	.	.	.														.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.				.	.	.	.	.	.	.	40	.	.	.	.	.	.							.	.	.	50	.	.	.	.	.	.	.	.	.				60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		128	.	130	.	.	.	.								.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.																					.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure									.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	G	R	L	C	Q	R	.	.	.	.	.	.	.	A	P	R	L	R	P	C	T	P	R	G	I	V	T	L	L	E	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	N	I	D	T	F	G	L	N	A	V	V	I	G	A	S	N	I	V	G	R	P	M	S	M	E	L	L
Query Conservation									.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation																																																																							.
Template Sequence		T	E	E	A	E	K	R	N	I	K	V	V	Y	A	P	G	A	S	T	D	S	A	V	E	L	T	I	G	L	M	I	A	A	A	R	K	M	Y	T	S	M	A	L	A	K	S	G	I	F	K	K	I	E	G	L	E	L	A	G	K	T	I	G	I	V	G	F	G	R	.	I	G	T	K	V	G	I	I	A	N
Template Known Secondary structure								T	T							T	T	T	T																		T										T	T											T	T							S		S		.
Template Predicted Secondary structure																																																																							.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.		.	.	.	.	.	.	.	160	.	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.													.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210					.	.	.	.	.	.	.	.				.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.									.	.	.																				.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.									.	.	.																				.	.	.	.
Query Sequence		L	A	G	C	T	T	T	V	T	H	R	F	T	K	.	.	.	.	.	.	.	.	.	.	.	.	N	L	R	H	H	V	E	N	A	D	L	L	I	V	A	V	.	.	.	.	G	K	P	G	F	I	P	G	.	.	.	D	W	I	K	E	G	A	I	V	I	D	V	G	I	N	R	L	E	N	.	.	.	.
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.									.	.	.																				.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.									.	.	.																				.	.	.	.
Template Conservation
Template Sequence		A	M	G	M	K	V	L	A	Y	D	I	L	D	I	R	E	K	A	E	K	I	N	A	K	A	V	S	L	E	E	L	L	K	N	S	D	V	I	S	L	H	V	T	V	S	K	D	A	K	P	I	I	D	Y	P	Q	F	E	L	M	K	D	N	V	I	I	V	N	T	S	R	A	V	A	V	N	G	K	A	L
Template Known Secondary structure			T	T								S	S									T	T														S										T	T	S			S	B								S		T	T						S	S		G	G	G	B
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
								238	.	240	.	.														.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	G	K	V	V	G	.	.	.	.	.	.	.	.	.	.	.	.	.	D	V	V	F	E	D	A	A	K	R	A	S	Y	I	T	P	V	P	G	G	V	G	P	M	T	V	A	T	L	I	E	N	T	L	Q	A	C	V	E	Y	H	D	P	Q
Query Conservation		.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	D	Y	I	K	K	G	K	V	Y	A	Y	A	T	D	V	F	W	N	E	P	P	K	E	E	W	E	L	E	L	L	K	H	E	R	V	I	V	T	T	H	I	G	A	Q	T	K	E	A	Q	K	R	V	A	E	M	T	T	Q	N	L	L	N	A	M	K	E	L
Template Known Secondary structure							T	T								S			S	S	S	S			S									S	T	T						S		T	T		S																						T
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions