Return to main results Retrieve Phyre Job Id

Job DescriptionP24186
Confidence96.80%DateThu Jan 5 11:41:04 GMT 2012
Rank166Aligned Residues75
% Identity23%Templatec2bmaA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:glutamate dehydrogenase (nadp+); PDBTitle: the crystal structure of plasmodium falciparum glutamate2 dehydrogenase, a putative target for novel antimalarial3 drugs
Resolution2.7 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   143......150.........160.........170.........180..... ....190..
Predicted Secondary structure 
















.

.............................
Query SS confidence 










































.






. . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  PRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCT. TTVTHRF. . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation    

  

  
 
 
 

 
 




 


 


 

    

.

  
  .............................
Alig confidence 


























.














.






.............................
Template Conservation         
      
 
  




 

.

   
  
   








  
 



 


   
           
   
Template Sequence  VYFVLEVLKSLNIPVEKQTAVVSGSGN. VALYCVQKLLHLNVKVLTLSDSNGYVYEPNGFTHENLEFLIDLKEEKKGRIK
Template Known Secondary structure  TTT

GGG

SS.TT

TT
SS


TTTT

GG
Template Predicted Secondary structure 








.




















Template SS confidence 















































































   214.....220.........230.........240 .........250.........260.........270.........280.........290..
 
   193......200.........210.........
Predicted Secondary structure  ...........













Query SS confidence  . . . . . . . . . . .


























Query Sequence  . . . . . . . . . . . TKNLRHHVENADLLIVAVGKPGFIPGD
Query Conservation  ...........
  
      




 


    
   
Alig confidence  ...........
















.








Template Conservation             
     
    





.
    

  
Template Sequence  EYLNHSSTAKYFPNEKPWGVPCTLAFPC. ATQNDVDLD
Template Known Secondary structure  GGGGT
SS

SS

TTSS

S
.SSTT
B
S
Template Predicted Secondary structure 

















.






Template SS confidence 





































   293......300.........310.........320 .........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions