Job Description P24186 Confidence 96.22% Date Thu Jan 5 11:41:04 GMT 2012 Rank 230 Aligned Residues 189 % Identity 17% Template c2at2B_ PDB info PDB header: PDB COMPND: Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.					.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.			.	.
Predicted Secondary structure																																					.	.	.	.																																						.	.
Query SS confidence																																					.	.	.	.																																						.	.
Query Sequence		M	A	A	K	I	I	D	G	K	T	I	A	Q	Q	V	R	S	E	V	A	Q	K	V	Q	A	R	I	A	A	G	L	R	A	P	G	.	.	.	.	L	A	V	V	L	V	G	S	N	P	A	S	Q	I	Y	V	A	S	K	R	K	A	C	E	E	V	G	F	V	S	R	S	Y	D	L	P	E	.	.	T	T
Query Conservation																																					.	.	.	.																																						.	.
Alig confidence				.																																	.	.	.	.														.	.	.																						.	.
Template Conservation				.																																																		.	.	.
Template Sequence		M	K	.	H	L	T	T	M	S	E	L	S	T	E	E	I	K	D	L	L	Q	T	A	Q	E	L	K	S	G	K	T	D	N	Q	L	T	G	K	F	A	A	N	L	F	F	E	P	S	T	R	T	R	.	.	.	F	S	F	E	V	A	E	K	K	L	G	M	N	V	L	N	L	D	G	T	S	T	S	V	Q
Template Known Secondary structure				.		B	S		S	T	T	S																		T				T	T		S	S								S	S							.	.	.									T	T	S								S	S				S	S
Template Predicted Secondary structure				.																																																		.	.	.
Template SS confidence
		1	.		.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.				.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.
Predicted Secondary structure																																																																									.
Query SS confidence																																																																									.
Query Sequence		S	E	A	E	L	L	E	L	I	D	T	L	N	A	D	N	T	I	D	G	I	L	V	Q	L	P	L	P	A	G	I	D	N	V	K	V	L	E	R	I	H	P	D	K	D	V	D	G	F	H	P	Y	N	V	G	R	L	C	Q	R	A	P	R	L	R	P	C	T	P	R	G	.	I	V	T	L	L	E	R	Y
Query Conservation																																																																									.
Alig confidence																	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template Conservation																	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	G	E	T	L	Y	D	T	I	R	T	L	E	S	I	.	G	V	D	V	C	V	I	R	H	S	E	D	E	Y	Y	E	E	L	V	S	Q	V	N	I	P	I	L	N	A	G	D	G	C	G	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	H	P	T	Q	S	L	L	D	L	M	T	I	Y	E	E	F
Template Known Secondary structure		S		T	T	T	T							T	T		.										S	S	S			S					T	T	T	T	S											.	.	.	.	.	.	.	.	.	.	.	.	.					T	T											S
Template Predicted Secondary structure																	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.														.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.			.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.												.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.																									.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.																									.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	I	D	T	F	G	L	N	A	V	V	I	G	A	.	.	S	N	I	V	G	R	P	M	S	M	E	L	L	L	A	G	C	T	T	T	V	T	H	R	.	.	.	.	.	.	.	.	.	.	.	F	T	K	N	L	R	H	H	V	E	N	A	D	L	L	I	V
Query Conservation																.	.																									.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.													.	.																									.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.
Template Sequence		N	.	T	F	K	G	L	T	V	S	I	H	G	D	I	K	H	S	R	V	A	R	S	N	A	E	V	L	T	R	L	G	A	R	V	L	F	S	G	P	S	E	W	Q	D	E	E	N	T	F	G	T	Y	V	S	M	D	E	A	V	E	S	S	D	V	V	M	L
Template Known Secondary structure		S	.			T	T		B					S					S	S	S										S	S	S		B								S	S	S		S		S	S							S					S	S		S
Template Predicted Secondary structure			.
Template SS confidence
		143		.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions