Job Description P24186 Confidence 98.60% Date Thu Jan 5 11:41:04 GMT 2012 Rank 53 Aligned Residues 201 % Identity 20% Template c1nytC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:shikimate 5-dehydrogenase; PDBTitle: shikimate dehydrogenase aroe complexed with nadp+ Resolution 1.50 Å

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		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.									.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.		.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.											.								.
Query SS confidence																																																				.	.	.	.	.	.	.	.											.								.
Query Sequence		K	A	C	E	E	V	G	F	V	S	R	S	Y	D	L	P	E	T	T	S	E	A	E	L	L	E	L	I	D	T	L	N	A	D	N	T	I	D	G	I	L	V	Q	L	P	L	P	A	G	I	.	.	.	.	.	.	.	.	D	N	V	K	V	L	E	R	I	H	.	P	D	K	D	V	D	G	.	F	H	P
Query Conservation																																																				.	.	.	.	.	.	.	.											.								.
Alig confidence																		.	.																.																	.	.	.	.	.	.	.	.											.								.
Template Conservation																		.	.																.
Template Sequence		Q	F	A	Q	Q	L	N	I	E	H	P	Y	G	R	V	L	.	.	A	P	I	N	D	F	I	N	T	L	N	A	F	F	S	.	A	G	G	K	G	A	N	V	T	V	P	F	K	E	E	A	F	A	R	A	D	E	L	T	E	R	A	A	L	A	G	A	V	N	T	L	M	R	L	E	D	G	R	L	L	G
Template Known Secondary structure								T										.	.			T	T												.	T	T								T	T										S										T	S		S						T	T	S
Template Predicted Secondary structure																		.	.																.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		Y	N	V	G	R	L	C	Q	R	A	P	R	L	R	P	C	T	P	R	G	I	V	T	L	L	E	R	Y	N	I	D	T	F	G	L	N	A	V	V	I	G	A	S	N	I	V	G	R	P	M	S	M	E	L	L	L	A	G	C	T	T	T	V	T	H	R	F	T	K	N	L	R	H	H	V	E	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.																														.																																.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Template Sequence		D	N	.	.	.	.	.	.	.	.	.	.	.	.	.	T	D	G	V	G	L	L	S	D	L	E	R	L	S	F	I	R	P	G	L	R	I	L	L	I	G	A	G	G	.	A	S	R	G	V	L	L	P	L	L	S	L	D	C	A	V	T	I	T	N	R	T	V	S	R	A	E	E	L	A	K	L	F	A	H
Template Known Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.														T				T	T									S		.												T	T								S	S											T	T	T
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Template SS confidence
		99	100														.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
																	202	.	.	.	.	.	.	.	210						.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	A	D	L	L	I	V	A	V	.	.	.	.	.	G	K	P	G	F	I	P	G	D	W	I	K	E	G	A	I	V	I	D	V	G	I	N	R	L	E	N	G	K	V	V	G	D	V	V	F	E	D	A	A	K	R	A	S	Y	I	T	P	V	P	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.																													.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.
Template Sequence		T	G	S	I	Q	A	L	S	M	D	E	L	E	G	H	E	F	D	L	I	I	N	A	T	S	S	G	I	S	G	D	I	P	A	I	P	S	S	L	I	H	P	G	I	Y	C	Y	D	M	F	Y	Q	K	G	K	T	P	.	.	.	.	.	.	.	F	L	A	W	C	E	Q	R	G	S	K	R	N	A	D	G
Template Known Secondary structure		T	S							T	G	G	G	T	T				S						S	S		G	G	G	T							G	G	G			T	T						S				S	S				.	.	.	.	.	.	.								T	T							T
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.								.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	G	P	M	T	V	A	T	L	I	E	N	T	L	Q	A	C	V	E	Y	H	D	P	Q
Query Conservation
Alig confidence		.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	L	G	M	L	V	A	Q	A	A	H	A	F	L	L	W	H	G	V	L
Template Known Secondary structure		.	.	.	.	.	.																	S	S
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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