Job Description P24186 Confidence 96.84% Date Thu Jan 5 11:41:04 GMT 2012 Rank 161 Aligned Residues 135 % Identity 18% Template c1js1Z_ PDB info PDB header:transferase Chain: Z: PDB Molecule:transcarbamylase; PDBTitle: crystal structure of a new transcarbamylase from the2 anaerobic bacterium bacteroides fragilis at 2.0 a3 resolution Resolution 2.00 Å

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		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.															.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.											.	.	.	.	.	110	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.
Query Sequence		A	C	E	E	V	G	F	V	S	R	S	Y	D	L	P	E	T	T	S	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	L	L	E	L	I	D	T	L	N	A	D	N	T	I	D	G	I	L	V	Q	L	P	L	P	A	G	.	.	.	.	.	.	.	.	.	.	I	D	N	V	K	V	L	E
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.														.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.
Template Sequence		A	A	L	N	L	G	M	N	V	I	V	L	D	I	N	Q	G	A	W	K	L	E	T	E	R	G	V	I	M	D	G	D	K	P	E	H	L	L	E	A	I	P	V	M	G	C	Y	.	.	C	D	I	I	G	V	R	S	F	A	R	F	E	N	R	E	Y	D	Y	N	E	V	I	I	N	Q	F	I	Q	H	S
Template Known Secondary structure						T	T										T	T	S						S	S	S					S	S														T	T	.	.		S										S	S							T	T										S
Template Predicted Secondary structure																																																	.	.
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.			.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.						.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure																																			.																						.	.	.	.	.
Query SS confidence																																			.																						.	.	.	.	.
Query Sequence		R	I	H	P	D	K	D	V	D	G	F	H	P	Y	N	V	G	R	L	C	Q	R	A	P	R	L	R	P	C	T	P	R	G	.	I	V	T	L	L	E	R	Y	N	I	D	T	F	G	L	N	A	V	V	I	G	.	.	.	.	.	A	S	N	I	V	G	R	P	M	S	M	E	L	L	L	A	G	C	T	T
Query Conservation																																			.																						.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.														.																						.	.	.	.	.				.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.
Template Sequence		G	R	P	V	F	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	E	A	A	T	R	H	P	L	Q	S	F	A	D	L	I	T	I	E	E	Y	K	K	T	A	R	P	K	V	V	M	T	W	A	P	H	P	R	P	L	P	Q	A	.	V	P	N	S	F	A	E	W	M	N	A	T	D	Y	E	F
Template Known Secondary structure		S	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S		S	S																		S	S	S	S											S	S				S		.											T	S	S	S
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.
Template SS confidence
		135	.	.	.	.	140															.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		187	.	.	190	.	.															.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	V	T	H	R	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	K	N	L	R	H	H	V	E	N	A	D	L	L	I	V
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	I	T	H	P	E	G	Y	E	L	D	P	K	F	V	G	N	A	R	V	E	Y	D	Q	M	K	A	F	E	G	A	D	F	I	Y	A
Template Known Secondary structure							T	T									T	T					S							T	T		S
Template Predicted Secondary structure
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions