Job Description P24186 Confidence 98.71% Date Thu Jan 5 11:41:04 GMT 2012 Rank 40 Aligned Residues 136 % Identity 13% Template c1gdhA_ PDB info PDB header:oxidoreductase(choh (d)-nad(p)+ (a)) Chain: A: PDB Molecule:d-glycerate dehydrogenase; PDBTitle: crystal structure of a nad-dependent d-glycerate2 dehydrogenase at 2.4 angstroms resolution Resolution 2.40 Å

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		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.															.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210					.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Query Sequence		L	E	R	Y	N	I	D	T	F	G	L	N	A	V	V	I	G	A	S	N	I	V	G	R	P	M	S	M	E	L	L	L	A	G	C	T	T	T	V	T	H	R	F	T	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	L	R	H	H	V	E	N	A	D	L	L	I	V	A	V	.	.	.	.	G
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Alig confidence																						.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Template Conservation																						.
Template Sequence		L	E	L	V	G	E	K	L	D	N	K	T	L	G	I	Y	G	F	G	S	.	I	G	Q	A	L	A	K	R	A	Q	G	F	D	M	D	I	D	Y	F	D	T	H	R	A	S	S	S	D	E	A	S	Y	Q	A	T	F	H	D	S	L	D	S	L	L	S	V	S	Q	F	F	S	L	N	A	P	S	T	P	E
Template Known Secondary structure		T	T	T						T	T									S		.											T	T	T								S	S											T					S	S									S										T	T
Template Predicted Secondary structure																						.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.		.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		212	.	.	.	.	.	.				.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.											.	.	240	.	.				.								.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.																				.	.	.	.	.	.	.	.	.	.						.	.	.		.	.	.	.	.	.	.
Query SS confidence									.	.	.																				.	.	.	.	.	.	.	.	.	.						.	.	.		.	.	.	.	.	.	.
Query Sequence		K	P	G	F	I	P	G	.	.	.	D	W	I	K	E	G	A	I	V	I	D	V	G	I	N	R	L	E	N	.	.	.	.	.	.	.	.	.	.	G	K	V	V	G	.	.	.	D	.	.	.	.	.	.	.	V	V	F	E	D	A	A	K	R	A	S	Y	I	T	P	V	P	G	G	V	G	P	M	T	V
Query Conservation									.	.	.																				.	.	.	.	.	.	.	.	.	.						.	.	.		.	.	.	.	.	.	.
Alig confidence									.	.	.																				.	.	.	.	.	.	.	.	.	.						.	.	.		.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	R	Y	F	F	N	K	A	T	I	K	S	L	P	Q	G	A	I	V	V	N	T	A	R	G	D	L	V	D	N	E	L	V	V	A	A	L	E	A	G	R	L	A	Y	A	G	F	D	V	F	A	G	E	P	N	I	N	E	G	Y	Y	D	L	P	N	T	F	L	F	P	H	I	G	S	A	A	T	Q	A	R
Template Known Secondary structure		T	T	T		B	S					T	T	S		T	T							S		G	G	G	B												T	S							S			T	T	T	T	S			T	T	G	G	G		T	T					S	S		T	T		S
Template Predicted Secondary structure
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	L	I	E	N	T	L	Q	A	C	V	E	Y	H	D	P	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	D	M	A	H	Q	A	N	D	L	I	D	A	L	F	G	G	A
Template Known Secondary structure																	T	T	S
Template Predicted Secondary structure
Template SS confidence
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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