Job Description P37049 Confidence 99.83% Date Thu Jan 5 11:54:38 GMT 2012 Rank 13 Aligned Residues 219 % Identity 17% Template c3qg5D_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:mre11; PDBTitle: the mre11:rad50 complex forms an atp dependent molecular clamp in dna2 double-strand break repair Resolution 3.40 Å

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		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.													.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.				.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.
Query Sequence		K	I	L	F	L	A	D	L	H	Y	S	R	F	V	P	.	.	.	.	.	.	.	.	.	.	.	.	L	S	L	I	S	D	A	I	A	L	G	I	E	Q	K	P	D	L	I	L	L	G	G	D	Y	V	L	F	D	.	.	.	M	S	L	N	F	S	A	F	S	D	V	L	S	P	L	A	E	C	A	P	T
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.
Template Conservation
Template Sequence		K	I	L	H	T	S	D	W	H	L	G	V	T	S	W	T	S	S	R	P	V	D	R	R	E	E	L	K	K	A	L	D	K	V	V	E	E	A	E	K	R	E	V	D	L	I	L	L	T	G	D	L	L	H	S	R	N	N	P	S	V	V	A	L	H	D	L	L	D	Y	L	K	R	X	X	R	T	A	P	V
Template Known Secondary structure											B	T					T	T	T	S				T																		T	T		S								S	B	S		S	S																			T	T	S
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	A	C	F	G	N	H	D	R	P	V	G	T	E	K	N	H	L	I	G	E	T	L	K	S	A	G	I	T	V	L	F	N	Q	A	T	V	I	A	T	P	N	R	Q	F	E	L	V	G	T	G	D	L	W	A	G	Q	C	K	P	P	P	A	S	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	V	L	P	G	N	H	D	W	K	G	L	K	L	F	G	N	F	V	T	S	I	S	S	D	I	T	F	V	X	S	F	E	P	V	D	V	E	A	K	R	G	Q	K	V	R	I	L	P	F	P	Y	P	D	E	S	E	A	L	R	K	N	E	G	D	F	R	F	F	L	E	S	R	L	N	K	L	Y	E	E
Template Known Secondary structure							S			S	T	T													S	S						S	S	S							T	T														S									T
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
					180	.	.	.	.	.	.	.	.	.											190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure		.	.	.											.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.											.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	A	N	L	P	R	L	V	L	A	H	.	.	.	.	.	.	.	.	.	.	N	P	D	S	K	E	V	M	R	D	E	P	W	D	L	M	L	C	G	H	T	H	G	G	Q	L	R	V	P	L	V	G	E	P	F	A	P	V	E	D	K	R	Y	V	A	G	L	N	A	F	G	E	R	H	I	Y	T
Query Conservation		.	.	.											.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.											.	.	.	.	.	.	.	.	.	.																										.
Template Conservation																																																		.
Template Sequence		A	L	K	K	E	D	F	A	I	F	X	G	H	F	T	V	E	G	L	A	G	Y	R	E	I	I	I	N	R	A	L	I	P	S	V	V	D	Y	A	A	L	G	H	I	H	S	F	R	.	E	I	Q	K	Q	P	L	T	I	Y	P	G	S	L	I	R	I	D	F	G	E	E	A	D	E	K	G	A	V	F	V
Template Known Secondary structure				T		S	S								S			T	T	S										G	G	G	S		S	S		S						S		S	S			.					T	T								S	S			S	G	G	G	T	T
Template Predicted Secondary structure																																																		.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.		.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	G	V	G	S	L	Y	G	L	R	L	N	C	R	P	E	V	T	M	L	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	L	K	R	G	E	P	P	R	Y	E	R	I	D	A	S	P	L	P	L	K	T	L
Template Known Secondary structure					S	S	S
Template Predicted Secondary structure
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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