Return to main results Retrieve Phyre Job Id

Job DescriptionP37049
Confidence99.51%DateThu Jan 5 11:54:38 GMT 2012
Rank34Aligned Residues163
% Identity19%Templatec3ivdA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:nucleotidase; PDBTitle: putative 5'-nucleotidase (c4898) from escherichia coli in2 complex with uridine
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   46...50........ .60.........70.........80..... ....90.........100.........110
Predicted Secondary structure 







..............









.









Query SS confidence 












. . . . . . . . . . . . . .


























.
























Query Sequence  AAPFKILFLADLH. . . . . . . . . . . . . . YSRFVPLSLISDAIALGIEQKPDLILL. GGDYVLFDMSLNFSAFSDVLSPLAE
Query Conservation      

  


 
..............         
   
  
    

 

 . 


                  
  
Alig confidence 












..............


























.
























Template Conservation     
 

 
 
 

                 

 
 
   
   
      
 

 

   

  
    
      

 
Template Sequence  AKDVTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEKAKNKATWFFDAGDYFTGPYISSLTKGKAIIDIXNT
Template Known Secondary structure 



TT

S
B

TTSGGGTS
B


SS
S

SSSSTTTTTT
Template Predicted Secondary structure 




































Template SS confidence 















































































   22.......30.........40.........50.........60.........70.........80.........90.........100.
 
   111........120.........130.........140...... ...150.........160...
Predicted Secondary structure 

















..............




.............
Query SS confidence 



































. . . . . . . . . . . . . .
















. . . . . . . . . . . . .
Query Sequence  CAPTFACFGNHDRPVGTEKNHLIGETLKSAGITVLF. . . . . . . . . . . . . . NQATVIATPNRQFELVG. . . . . . . . . . . . .
Query Conservation        
 



                  
   
 ..............
    
        
 
.............
Alig confidence 














...

















..............
















.............
Template Conservation   
 
    





 ...
   
           
 


             
 
    
 





             
Template Sequence  XPFDAVTIGNHEFDH. . . GWDNTLLQLSQAKFPIVQGNIFYQNSSKSFWDKPYTIIEKDGVKIGVIGLHGVFAFNDTVSA
Template Known Secondary structure  S

S


GGGGTT...
TT
SS
B


STTSS
BSSS
STT
S
G
Template Predicted Secondary structure 










...
































Template SS confidence 















































































   102.......110...... ...120.........130.........140.........150.........160.........170........
 
   164.....170.........180.........190. ........200.........210.
Predicted Secondary structure  ........














...................







Query SS confidence  . . . . . . . .



























. . . . . . . . . . . . . . . . . . .



















Query Sequence  . . . . . . . . TGDLWAGQCKPPPASEANLPRLVLAHNP. . . . . . . . . . . . . . . . . . . DSKEVMRDEPWDLMLCGHTH
Query Conservation  ........                     


 
 
...................          









Alig confidence  ........



























...................



















Template Conservation           
           

   
 



 
 
                             

 




 
Template Sequence  ATRVGIEARDEIKWLQRYIDELKGKVDLTVALIHEGVPARQSSXGGTDVRRALDKDIQTASQVKGLDILITGHAH
Template Known Secondary structure  GGSTT

TTT
S
SS




SSGGGSS




SS

SS
Template Predicted Secondary structure 



































Template SS confidence 










































































   179180.........190.........200.........210.........220.........230.........240.........250...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions