Job Description P37049 Confidence 97.77% Date Thu Jan 5 11:54:38 GMT 2012 Rank 60 Aligned Residues 134 % Identity 14% Template c3e0jG_ PDB info PDB header:transferase Chain: G: PDB Molecule:dna polymerase subunit delta-2; PDBTitle: x-ray structure of the complex of regulatory subunits of2 human dna polymerase delta Resolution 3.00 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.							.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.			.	.	.	.	.	.	70	.	.	.	.	.												.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.																				.	.													.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.																				.	.													.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	P	G	W	F	E	L	I	R	H	R	L	A	F	F	K	D	.	.	.	.	.	.	N	A	A	P	F	K	I	L	F	L	A	D	L	H	Y	S	R	F	V	.	.	P	L	S	L	I	S	D	A	I	A	L	G	.	.	.	.	.	.	.	.	.	.	.	I	E	Q	K	P	D	L	I	L	L	G	G	D
Query Conservation																			.	.	.	.	.	.																				.	.													.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.																				.	.													.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	D	G	K	F	L	V	E	D	Y	C	F	A	D	L	A	P	Q	K	P	A	P	P	L	D	T	D	R	F	V	L	L	V	S	G	L	G	L	G	G	G	G	G	E	S	L	L	G	T	Q	L	L	V	D	V	V	T	G	Q	L	G	D	E	G	E	Q	C	S	A	A	H	V	S	R	V	I	L	A	G	N
Template Known Secondary structure		T	T	S	S										B											S	S												B	T	S	S																	T	S	S	S									T	T								S
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		89	90	.	.	.								.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.						.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.																																									.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.																																									.	.	.	.	.
Query Sequence		Y	V	L	F	D	.	.	.	.	.	.	.	M	S	L	N	F	S	A	F	S	D	V	L	S	P	L	A	E	C	A	P	T	F	A	C	F	G	N	H	D	R	P	V	G	T	E	K	N	H	L	I	.	.	.	.	.	G	E	T	L	K	S	A	G	I	T	V	L	F	N	Q	A	T	V	I	A	T	P	N
Query Conservation							.	.	.	.	.	.	.																																									.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.																																									.	.	.	.	.																		.
Template Conservation																																																																												.
Template Sequence		L	L	S	H	L	T	K	K	T	Q	A	A	S	V	E	A	V	K	M	L	D	E	I	L	L	Q	L	S	A	S	V	P	V	D	V	M	P	G	E	F	D	P	T	N	Y	T	L	P	Q	Q	P	L	H	P	C	M	F	P	L	A	T	A	Y	S	T	L	Q	L	V	T	N	P	Y	Q	.	A	T	I	D	G
Template Known Secondary structure		S	B																													S								T	T	S	S	S		S	S	S	S						G	G	G						T	S	T	T						S	S			.				T	T
Template Predicted Secondary structure																																																																												.
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320		.	.	.	.	.
		157	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	F	E	L	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	R	F	L	G	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		339	340	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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