Job Description P37049 Confidence 99.72% Date Thu Jan 5 11:54:38 GMT 2012 Rank 21 Aligned Residues 152 % Identity 23% Template c1s3mA_ PDB info PDB header:phosphodiesterase Chain: A: PDB Molecule:hypothetical protein mj0936; PDBTitle: structural and functional characterization of a novel2 archaeal phosphodiesterase Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	K	I	L	F	L	A	D	L	H	Y	S	R	F	V	P	L	S	L	I	S	D	A	I	A	L	G	I	E	Q	K	P	D	L	I	L	L	G	G	D	Y	V	L	F	D	M	S	L	N	F	S	A	F	S	D	V	L	S	P	L	A	E	C	A	P	T	F	A	C	F	G	N	H	D	R	P	V	G	T	E
Query Conservation
Alig confidence												.	.	.	.																																				.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Template Conservation												.	.	.	.																																				.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Template Sequence		M	K	I	G	I	M	S	D	T	H	.	.	.	.	D	H	L	P	N	I	R	K	A	I	E	I	F	N	D	E	N	V	E	T	V	I	H	C	G	D	F	V	S	L	F	V	I	K	E	.	.	.	.	.	.	.	.	.	F	E	N	L	N	A	N	I	I	A	T	Y	G	N	N	D	.	.	.	.	.	G
Template Known Secondary structure											T	.	.	.	.	T														T	S			S						S				S	T						.	.	.	.	.	.	.	.	.	G	G	G			S								T	T		.	.	.	.	.
Template Predicted Secondary structure												.	.	.	.																																				.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10					.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.										.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.						.
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.				.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure																																																																	.	.	.
Query SS confidence																																																																	.	.	.
Query Sequence		K	N	H	L	I	G	E	T	L	K	S	A	G	I	T	V	L	F	N	Q	A	T	V	I	A	T	P	N	R	Q	F	E	L	V	G	T	G	D	L	W	A	G	Q	C	K	P	P	P	A	S	E	A	N	L	P	R	L	V	L	A	H	N	P	.	.	.	D	S	K	E	V	M	R	D	E	P	W	D	L	M
Query Conservation																																																																	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	R	C	K	L	K	E	W	L	K	D	I	N	E	E	N	I	I	D	D	F	I	S	V	E	I	D	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	F	F	I	T	H	G	H	H	Q	S	V	L	E	M	A	I	K	S	G	L	Y	D	V	V
Template Known Secondary structure															T	T					S							T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T															S
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.																											.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	C	G	H	T	H	G	G	Q	L	R	V	P	L	V	G	E	P	F	A	P	V	E	D	K	R	Y	V	A	G	L	N	A	F	G	E	R	H	I	Y	T	T	R	G	V	G	S	L	Y	G	L	R	L	N	C	R	P	E	V	T	M	L	E	L
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.												.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.												.	.	.
Template Sequence		I	Y	G	H	T	H	E	R	V	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	V	D	D	V	L	.	V	I	N	P	G	E	C	C	G	Y	L	.	.	.	T	G	I	P	T	I	G	I	L	D	T
Template Known Secondary structure					S	S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T			.							S	S		T	T	.	.	.	T	S									T
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.												.	.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.																						.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.				.	.	.	.	.	150	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions