|   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | G | F | I | G | C | G | N | M | G | K | A | I | L | G | G | L | I | A | S | G | Q | V | L | P | G | Q | I | W | V | Y | T | P | S | P | D | K | V | A | A | L | H | D | Q | F | G | I | N | A | A | E | S | A | Q | E | V | A | Q | I | A | D | I | I | F | A | A | V | K | P | G | I | M | I | K | V | L | S | E | I | T |
Query Conservation |   |
|
|
|
|
|   |
|   |
|
|   |   |
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|   |
|   |
|
|   |
|
|
|   |   |
|   |   |   |
| . | . | . | . | . | . | . | . |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |
|   |   |   |   |
|   |   |
|   |   |   |
|   |
Template Sequence |   |
L | N | F | V | G | T | G | T | L | T | R | F | F | L | E | C | L | K | I | G | Y | . |
. |
. |
. |
. |
. |
. |
. |
I | L | S | R | S | I | D | R | A | R | N | L | A | E | V | Y | G | . |
. |
. |
. |
G | K | A | A | T | L | E | K | H | P | E | V | V | F | V | I | V | P | D | R | Y | I | K | T | V | A | N | H | L | N |
Template Known Secondary structure |   |
|  |  |  | S |
|
|  |  |  |  |  |  |  |  | T | T |
|
|
|
| . | . | . | . | . | . | . | . |  |  |
| S | S |  |  |  |  |  |  |  |  |  |  | T |
| . | . | . | . |
|
|
|
| S | S |
|
|
|
|
|
|  |  |  |
| S |
| T | T | T |  |  |  |  |  | T | T | T |
|
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | |
|
|
|
|
|
|
|
. | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | |
|
|
|
. | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
  |
  |   |
85 | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | |
. | . | . | . | 160 | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|  |  |  |  |
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
Query Sequence |   |
S | S | L | N | K | D | S | L | V | V | S | I | A | A | G | V | T | L | D | Q | L | A | R | A | L | G | H | D | R | K | I | I | R | A | M | P | N | T | P | A | L | V | N | A | G | M | T | S | V | T | P | N | A | L | V | T | P | E | D | T | A | D | V | L | N | I | F | R | C | F | G | . |
E | A | E | V | I | A | E | P |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
| . |   |   |   |   |   |   |   |   |
Alig confidence |   |
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
Template Conservation |   |
  | . | . | . |   |   |   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |   | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |   |   |
|   |   |
|
Template Sequence |   |
L | . |
. |
. |
G | D | A | V | L | V | H | C | S | G | F | L | S | S | E | I | F | K | . |
. |
. |
K | S | G | R | A | S | I | H | P | N | F | S | F | L | E | K | A | L | E | X | K | D | Q | I | V | F | G | L | E | G | D | E | R | G | L | P | I | V | K | K | I | A | E | E | I | S | G | K | Y | F | V | I | P | S | E |
Template Known Secondary structure |   |
| . | . | . | S | S |
|
|  |  |  |
|
| S | S | S |
| G | G | G | G |
| . | . | . | S | S | S |  |  |  |  |  |  |
| S |
|
|
| T | T | G | G | G |
| G | G | G |
|
|  |  |  |
|
|
| T | T | T |  |  |  |  |  |  |  |  |  |  |  |
| S |
|  |  |  |
|
| T | T |
Template Predicted Secondary structure |   |
 | . | . | . |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  | . | . | . |  |  |  |  |
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
78 | |
|
|
. | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | |
|
|
. | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . |
  |
  |   |
164 |
Predicted Secondary structure |   |
 |
Query SS confidence |   |
|
Query Sequence |   |
M |
Query Conservation |   |
  |
Alig confidence |   |
|
Template Conservation |   |
|
Template Sequence |   |
K |
Template Known Secondary structure |   |
|
Template Predicted Secondary structure |   |
|
Template SS confidence |   |
|
  |   |
154 |
  |