 |
Job Description | P0A9L8 | Confidence | 97.94% | Date | Thu Jan 5 11:10:40 GMT 2012 |
Rank | 291 | Aligned Residues | 71 |
% Identity | 21% | Template | d1vjta1 |
SCOP info | NAD(P)-binding Rossmann-fold domains
| NAD(P)-binding Rossmann-fold domains
| LDH N-terminal domain-like
|
Resolution | 2.50 |
|
 |
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | |
|
. | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | |
|
. | . | . | . | 40 | . | |
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 50 | |
|
|
|
. | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  | . | . |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  | . | . |  |
|
|  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
|
| . | . | . | . |
|  |  |  |
|
|  |  |  |  |  |  |  |
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | K | I | G | F | I | G | C | G | N | M | G | K | A | I | L | G | G | . |
. |
L | I | A | S | G | Q | V | L | P | G | Q | I | W | V | Y | . |
. |
T | P | S | P | D | K | . |
. |
. |
. |
. |
. |
. |
V | A | A | L | H | D | Q | F | G | . |
. |
. |
. |
I | N | A | A | E | S | A | Q | E | V | A | Q | I | A | D | I | I |
Query Conservation |   |
  |
|
|
|
|
|
|   |
|   |
|
|   |   |
|
|   |   | . | . |
|   |   |   |
|   |   |   |   |   |   |
|   |
|   | . | . |   |
|   |   |   |   | . | . | . | . | . | . | . |   |   |   |
|   |   |   |   |   | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|
|
|
|
|   |
|
|
|   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |
|   |
|   |
|
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|   |   |
|
|
|   |   |
|
|   |
|
Template Sequence |   |
X | K | I | S | I | I | G | A | G | S | V | R | F | A | L | Q | L | V | G | D | I | A | Q | T | E | E | L | S | R | E | D | T | H | I | Y | X | X | D | V | H | E | R | R | L | N | A | S | Y | I | L | A | R | K | Y | V | E | E | L | N | S | P | V | K | I | V | K | T | S | S | L | D | E | A | I | D | G | A | D | F | I |
Template Known Secondary structure |   |
 |  |  |  |  |  | T | T | T | S |  |  |  |  |  |  |  |  |  |  |  |  |  | S | T | T | T |
| S | T | T |  |  |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|
|  |  |  |  |  | S |
|  |  |  |  |  | T | T |
| S |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
  |
  |   |
68 | . | 70 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|  |
Query SS confidence |   |
|
|
|
|
|
|
Query Sequence |   |
F | A | A | V | K | P |
Query Conservation |   |
|
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |   |
Template Sequence |   |
I | N | T | A | Y | P |
Template Known Secondary structure |   |
 |  |
|
|
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
  |   |
81 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|