Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9L8
Confidence99.60%DateThu Jan 5 11:10:40 GMT 2012
Rank89Aligned Residues199
% Identity13%Templatec3prjB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:udp-glucose 6-dehydrogenase; PDBTitle: role of packing defects in the evolution of allostery and induced fit2 in human udp-glucose dehydrogenase.
Resolution3.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20..... ....30.........40....... ..50.........60..
Predicted Secondary structure 





..






..................




Query SS confidence 






















. .





















. . . . . . . . . . . . . . . . . .














Query Sequence  KKIGFIGCGNMGKAILGGLIASG. . QVLPGQIWVYTPSPDKVAALHD. . . . . . . . . . . . . . . . . . QFGINAAESAQEVAQ
Query Conservation   





 
 

  

  
   
..      
 
  
       
  ..................               
Alig confidence 






















..
....
















..................














Template Conservation 


 




 


  
  

  
   .... 
 
 
     
  
  
  

 



  
           

   

  
Template Sequence  KKICCIGAGYVGGPTCSVIAHMCPEI. . . . RVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIK
Template Known Secondary structure 


STT
TTS....
S
SSS
SS

TTBTTTS
Template Predicted Secondary structure 







....

















Template SS confidence 















































































   5....10.........20.........30 .........40.........50.........60.........70.........80
 
   63......70... ......80.........90.... .....100.........110.........120.....
Predicted Secondary structure 


...............




..














Query SS confidence 










. . . . . . . . . . . . . . .




















. .






























Query Sequence  IADIIFAAVKP. . . . . . . . . . . . . . . GIMIKVLSEITSSLNKDSLVV. . SIAAGVTLDQLARALGHDRKIIRAMPNTPAL
Query Conservation    




 
  ...............     
   
         
 ..
                    
   
     
Alig confidence 










...............




















..






























Template Conservation   





 



            

  
      
      
 


  



  
   
   
        
  
   
Template Sequence  EADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDANTKPNLNLQVLSNP
Template Known Secondary structure  T
S




B
SSSTTTTTSB
TT

S

SS

SS

SS


Template Predicted Secondary structure 




































Template SS confidence 















































































   81........90.........100.........110.........120.........130.........140.........150.........160
 
   126...130... ......140 .........150.... .....160.........170...... ...180.........
Predicted Secondary structure 




..........




...
..


.
Query SS confidence 







. . . . . . . . . .






. . .













. .





















.












Query Sequence  VNAGMTSV. . . . . . . . . . TPNALVT. . . PEDTADVLNIFRCF. . GEAEVIAEPMIHPVVGVSGSSP. AYVFMFIEAMADA
Query Conservation          ..........       ...         
    ..
              
      .  
    

    
Alig confidence 







..........






...













..





















.












Template Conservation 

   
          


 
         
      

        
       

  

  
   
  

  

 
 
Template Sequence  EFLAEGTAIKDLKNPDRVLIGGDETPEGQRAVQALCAVYEHWVPREKILTTNTWSSELSKLAANAFLAQRISSINSISAL
Template Known Secondary structure 



TTSS
S


SSTTS
GGG
Template Predicted Secondary structure 





















Template SS confidence 















































































   161........170.........180.........190.........200.........210.........220.........230.........240
 
   190.........200.....
Predicted Secondary structure 



Query SS confidence 















Query Sequence  AVLGGMPRAQAYKFAA
Query Conservation      

    
     
Alig confidence 















Template Conservation   
  


  

  
  
Template Sequence  CEATGADVEEVATAIG
Template Known Secondary structure  T

Template Predicted Secondary structure 



Template SS confidence 















   241........250......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions