Job Description P0A9L8 Confidence 99.92% Date Thu Jan 5 11:10:40 GMT 2012 Rank 26 Aligned Residues 257 % Identity 16% Template c3pefA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:6-phosphogluconate dehydrogenase, nad-binding; PDBTitle: crystal structure of gamma-hydroxybutyrate dehydrogenase from2 geobacter metallireducens in complex with nadp+ Resolution 2.07 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	K	I	G	F	I	G	C	G	N	M	G	K	A	I	L	G	G	L	I	A	S	G	Q	V	L	P	G	Q	I	W	V	Y	T	P	S	P	D	K	V	A	A	L	H	D	Q	F	G	I	N	A	A	E	S	A	Q	E	V	A	Q	I	A	D	I	I	F	A	A	V	K	P	G	I	M	I	K	V	L	S
Query Conservation
Alig confidence																											.	.	.	.																			.									.
Template Conservation																											.	.	.	.																			.									.
Template Sequence		S	Q	K	F	G	F	I	G	L	G	I	M	G	S	A	M	A	K	N	L	V	K	A	G	C	.	.	.	.	S	V	T	I	W	N	R	S	P	E	K	A	E	E	L	A	A	L	.	G	A	E	R	A	A	T	P	.	E	V	V	E	S	C	P	V	T	F	A	M	L	A	D	P	A	A	A	E	E	V	C
Template Known Secondary structure											S													T	T		.	.	.	.							S	S	G	G	G	G						T	.	T					S			.							S							S	S
Template Predicted Secondary structure																											.	.	.	.																			.									.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.					.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		82					.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.			.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure			.	.	.	.																				.	.
Query SS confidence			.	.	.	.																				.	.
Query Sequence		E	.	.	.	.	I	T	S	S	L	N	K	D	S	L	V	V	S	I	A	A	G	V	T	.	.	L	D	Q	L	A	R	A	L	G	H	D	R	K	I	I	R	A	M	P	N	T	P	A	L	V	N	A	G	M	T	S	V	T	P	N	A	L	V	T	P	E	D	T	A	D	V	L	N	I	F	R	C	F	G
Query Conservation			.	.	.	.																				.	.
Alig confidence			.	.	.	.																				.	.
Template Conservation
Template Sequence		F	G	K	H	G	V	L	E	G	I	G	E	G	R	G	Y	V	D	M	S	T	V	D	P	A	T	S	Q	R	I	G	V	A	V	V	A	K	G	G	R	F	L	E	A	P	V	S	G	S	K	K	P	A	E	D	G	T	L	I	I	L	A	A	G	D	R	N	L	Y	D	E	A	M	P	G	F	E	K	M	G
Template Known Secondary structure			S	T	T								T	T							S																	T	T																		T
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
			156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.			.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure		.																								.	.
Query SS confidence		.																								.	.
Query Sequence		.	E	A	E	V	I	A	E	P	M	I	H	P	V	V	G	V	S	G	S	S	P	A	Y	.	.	V	F	M	F	I	E	A	M	A	D	A	A	V	L	G	G	M	P	R	A	Q	A	Y	K	F	A	A	Q	A	V	M	G	S	A	K	M	V	L	E	T	G	E	H	P	G	A	L	K	D	M	V	C	S	P
Query Conservation		.																								.	.
Alig confidence		.																								.	.										.																														.	.	.	.
Template Conservation																																					.																														.	.	.	.
Template Sequence		K	K	I	I	H	L	G	D	V	G	K	G	A	E	M	K	L	V	V	N	M	V	M	G	G	M	M	A	C	F	C	E	G	L	A	.	L	G	E	K	A	G	L	A	T	D	A	I	L	D	V	I	G	A	G	A	M	A	N	P	M	F	A	L	K	.	.	.	.	G	G	L	I	R	D	R	N	F	A	P
Template Known Secondary structure								S	S	T	T																										.					T	T													S	T	T									.	.	.	.						T	T
Template Predicted Secondary structure																																					.																														.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.					220	.	.	.	.	.	.	.	.	.	230
		233	.	.	.								.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.
Query Sequence		G	G	T	T	.	.	.	.	.	.	.	I	E	A	V	R	V	L	E	E	K	G	F	R	A	A	V	I	E	A	M	T	K	C	M	E	K	S	E	K	L	S	K	S
Query Conservation						.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	F	P	L	K	H	M	Q	K	D	L	R	L	A	V	A	L	G	D	R	V	G	Q	P	L	V	A	S	A	A	A	N	E	L	F	K	G	A	R	A	A	G	F	G
Template Known Secondary structure		S	S	B																			T																			T	T		T
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions