Job Description P0A9L8 Confidence 99.94% Date Thu Jan 5 11:10:40 GMT 2012 Rank 20 Aligned Residues 231 % Identity 16% Template c3ktdC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:prephenate dehydrogenase; PDBTitle: crystal structure of a putative prephenate dehydrogenase (cgl0226)2 from corynebacterium glutamicum atcc 13032 at 2.60 a resolution Resolution 2.60 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.				.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.	.
Query SS confidence																																																									.	.	.
Query Sequence		M	E	K	K	I	G	F	I	G	C	G	N	M	G	K	A	I	L	G	G	L	I	A	S	G	Q	V	L	P	G	Q	I	W	V	Y	T	P	S	P	D	K	V	A	A	L	H	D	Q	F	G	I	N	A	A	E	.	.	.	S	A	Q	E	V	A	Q	I	A	D	I	I	F	A	A	V	K	P	G	I	M	I
Query Conservation																																																									.	.	.
Alig confidence																												.	.	.	.																										.	.	.
Template Conservation																												.	.	.	.
Template Sequence		I	S	R	P	V	C	I	L	G	L	G	L	I	G	G	S	L	L	R	D	L	H	A	A	N	H	.	.	.	.	S	V	F	G	Y	N	R	S	R	S	G	A	K	S	A	V	D	E	G	F	D	V	S	A	D	L	E	A	T	L	Q	R	A	A	A	E	D	A	L	I	V	L	A	V	P	X	T	A	I	D
Template Known Secondary structure			S	S								S													T	T		.	.	.	.							S	S										T	T					S												T	T							S
Template Predicted Secondary structure																												.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.					.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.											.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure																								.																												.	.	.	.	.	.	.	.	.	.																.	.	.	.	.
Query SS confidence																								.																												.	.	.	.	.	.	.	.	.	.																.	.	.	.	.
Query Sequence		K	V	L	S	E	I	T	S	S	L	N	K	D	S	L	V	V	S	I	A	A	G	.	V	T	L	D	Q	L	A	R	A	L	G	H	D	R	K	I	I	R	A	M	P	N	T	P	A	L	V	.	.	.	.	.	.	.	.	.	.	N	A	G	M	T	S	V	T	P	N	A	L	V	T	P	.	.	.	.	.
Query Conservation																								.																												.	.	.	.	.	.	.	.	.	.																.	.	.	.	.
Alig confidence										.														.																												.	.	.	.	.	.	.	.	.	.																.	.	.	.	.
Template Conservation										.
Template Sequence		S	L	L	D	A	V	H	T	.	H	A	P	N	N	G	F	T	D	V	V	S	V	K	T	A	V	Y	D	A	V	K	A	R	N	X	Q	H	R	Y	V	G	S	H	P	X	A	G	T	A	N	G	W	S	A	S	X	D	G	L	F	K	R	A	V	W	V	V	T	F	D	Q	L	F	D	G	T	D	I	N	S
Template Known Secondary structure										.			T	T								S		S										T	T		G	G	G	B						T	T						G	G	G			S	S	S	S	T	T								G	G	G	T	S	S
Template Predicted Secondary structure										.
Template SS confidence
		82	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
					142	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.															.
Query SS confidence		.	.	.															.
Query Sequence		.	.	.	E	D	T	A	D	V	L	N	I	F	R	C	F	G	.	E	A	E	V	I	A	E	P	M	I	H	P	V	V	G	V	S	G	S	S	P	A	Y	V	F	M	F	I	E	A	M	A	D	A	A	V	L	G	G	M	P	R	A	Q	A	Y	K	F	A	A	Q	A	V	M	G	S	A	K	M	V	L	E
Query Conservation		.	.	.															.
Alig confidence		.	.	.															.																																				.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.
Template Sequence		T	W	I	S	I	W	K	D	V	V	Q	X	A	L	A	V	G	A	E	V	V	P	S	R	V	G	P	H	D	A	A	A	A	R	V	S	H	L	T	H	I	L	A	E	T	L	A	I	V	G	D	N	G	.	.	.	.	.	.	G	A	L	S	L	S	L	A	A	G	S	Y	R	D	S	T	R	V	A	G	T
Template Known Secondary structure																	T	T																			T																		.	.	.	.	.	.																T	G	G	G	G	S
Template Predicted Secondary structure																																																							.	.	.	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.							.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	E	H	P	G	A	L	K	D	M	V	C	S	P	G	G	T	T	I	E	A	V	R	V	L	E	E
Query Conservation
Alig confidence			.	.	.
Template Conservation			.	.	.
Template Sequence		D	.	.	.	P	G	L	V	R	A	X	C	E	S	N	A	G	P	L	V	K	A	L	D	E	A	L	A
Template Known Secondary structure			.	.	.										T	T
Template Predicted Secondary structure			.	.	.
Template SS confidence
		236				.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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