Job Description P0A9L8 Confidence 99.57% Date Thu Jan 5 11:10:40 GMT 2012 Rank 91 Aligned Residues 200 % Identity 15% Template c3g79A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:ndp-n-acetyl-d-galactosaminuronic acid dehydrogenase; PDBTitle: crystal structure of ndp-n-acetyl-d-galactosaminuronic acid2 dehydrogenase from methanosarcina mazei go1 Resolution 2.40 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40					.	.	.	.	.	.	.																					.	.	50	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	K	I	G	F	I	G	C	G	N	M	G	K	A	I	L	G	G	L	I	A	S	G	Q	V	L	P	G	Q	I	W	V	Y	T	P	S	P	D	.	.	.	.	K	V	A	A	L	H	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	F	G	I	N	A	A	E	S	A	Q
Query Conservation																																								.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.												.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.
Template Sequence		K	K	I	G	V	L	G	M	G	Y	V	G	I	P	A	A	V	L	F	A	D	A	P	C	F	.	.	E	K	V	L	G	F	Q	R	N	S	K	S	S	G	Y	K	I	E	M	L	N	R	G	E	S	P	L	K	G	E	E	P	G	L	E	E	L	I	G	K	V	V	K	A	G	K	F	E	C	T	P	D	F
Template Known Secondary structure										S	T	T											S	T	T		.	.											T	T	T	T	T						T	T	T				S	S			G	G	G											T	T						S		G
Template Predicted Secondary structure																											.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.			.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		59	60	.	.	.	.	.	.	.	.	.	70	.	.													.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.				.	.	.	.	.	100	.	.	.	.	.	.	.	.									.	110	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.															.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.															.	.	.	.	.	.	.	.
Query Sequence		E	V	A	Q	I	A	D	I	I	F	A	A	V	K	.	.	.	.	.	.	.	.	.	.	.	.	P	G	I	M	I	K	V	L	S	E	I	T	S	S	L	N	K	D	S	L	V	V	.	.	.	S	I	A	A	G	V	T	L	D	Q	L	A	R	A	.	.	.	.	.	.	.	.	L	G	H	D	R	K	I
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.															.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.															.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	R	I	S	E	L	D	A	V	T	L	A	I	Q	T	P	F	A	N	P	K	D	L	E	P	D	F	S	A	L	I	D	G	I	R	N	V	G	K	Y	L	K	P	G	M	L	V	V	L	E	S	T	I	T	P	G	T	T	E	G	M	A	K	Q	I	L	E	E	E	S	G	L	K	A	G	E	D	F	A	L
Template Known Secondary structure		G	G	G	G	G		S												S	S			S	S																			T	T							S				T	T	T	T	T	T														B	T	T	T	B
Template Predicted Secondary structure
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		116	.	.	.			120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.			.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure						.	.																																				.	.																							.
Query SS confidence						.	.																																				.	.																							.
Query Sequence		I	R	A	M	.	.	P	N	T	P	A	L	V	N	A	G	M	T	S	V	T	P	N	A	L	V	T	P	E	D	T	A	D	V	L	N	I	F	R	C	F	.	.	G	E	A	E	V	I	A	E	P	M	I	H	P	V	V	G	V	S	G	S	S	P	.	A	Y	V	F	M	F	I	E	A	M	A	D	A	A
Query Conservation						.	.																																				.	.																							.
Alig confidence						.	.																																				.	.																							.
Template Conservation
Template Sequence		A	H	A	P	E	R	V	M	V	G	R	L	L	K	N	I	R	E	H	D	R	I	V	G	G	I	D	E	A	S	T	K	R	A	V	E	L	Y	S	P	V	L	T	V	G	Q	V	I	P	M	S	A	T	A	A	E	V	T	K	T	A	E	N	T	F	R	D	L	Q	I	A	A	I	N	Q	L	A	L	Y	C
Template Known Secondary structure										T	T	S								S							S	S												G	G	G		S	S
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	G	G	M	P	R	A	Q	A	Y	K	F	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	A	M	G	I	N	V	Y	D	V	R	T	G	V
Template Known Secondary structure				T	T
Template Predicted Secondary structure
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions