Job Description P0A9L8 Confidence 99.97% Date Thu Jan 5 11:10:40 GMT 2012 Rank 10 Aligned Residues 260 % Identity 16% Template c3b1fA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:putative prephenate dehydrogenase; PDBTitle: crystal structure of prephenate dehydrogenase from streptococcus2 mutans Resolution 2.10 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																																				.
Query SS confidence																																																				.
Query Sequence		E	K	K	I	G	F	I	G	C	G	N	M	G	K	A	I	L	G	G	L	I	A	S	G	Q	V	L	P	G	Q	I	W	V	Y	T	P	S	P	D	K	V	A	A	L	H	D	Q	F	G	I	.	N	A	A	E	S	A	Q	E	V	A	Q	I	A	D	I	I	F	A	A	V	K	P	G	I	M	I	K	V	L
Query Conservation																																																				.
Alig confidence																												.	.																							.
Template Conservation																												.	.
Template Sequence		E	K	T	I	Y	I	A	G	L	G	L	I	G	A	S	L	A	L	G	I	K	R	D	H	P	H	.	.	Y	K	I	V	G	Y	N	R	S	D	R	S	R	D	I	A	L	E	R	G	I	V	D	E	A	T	A	D	F	K	V	F	A	A	L	A	D	V	I	I	L	A	V	P	I	K	K	T	I	D	F	I
Template Known Secondary structure											S															T	T	.	.	S							S	S										T	T	S		S				S		T	T	T	T	G	G	G		S						S
Template Predicted Secondary structure																												.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.			.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110					.	.	.	.	.	.	.	.	.	120								.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.											.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.											.	.	.	.	.	.	.
Query Sequence		S	E	I	T	S	S	L	N	K	D	S	L	V	V	S	I	A	A	G	V	T	L	D	Q	L	A	R	A	L	G	.	.	.	.	H	D	R	K	I	I	R	A	M	P	.	.	.	.	.	.	.	N	T	P	A	L	V	N	A	G	M	T	S	V	T	P	N	A	L	V	T	P	E	D	T	A	D	V	L	N
Query Conservation																																.	.	.	.											.	.	.	.	.	.	.
Alig confidence																																.	.	.	.											.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	I	L	A	D	L	D	L	K	E	D	V	I	I	T	D	A	G	S	T	K	Y	E	I	V	R	A	A	E	Y	Y	L	K	D	K	P	V	Q	F	V	G	S	H	P	X	A	S	G	A	V	A	A	N	V	N	L	F	E	N	A	Y	Y	I	F	S	P	S	C	L	T	K	P	N	T	I	P	A	L	Q	D
Template Known Secondary structure						T	S				T	T								S														T	T	S	S										.			T	T	S			T	T	T	T	T	T	S								T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		150	.	.	.	.	.		.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		I	F	R	C	F	G	.	E	A	E	V	I	A	E	P	M	I	H	P	V	V	G	V	S	G	S	S	P	A	Y	V	F	M	F	I	E	A	M	A	D	A	A	V	L	G	G	M	P	R	A	Q	A	Y	K	F	A	A	Q	A	V	M	G	S	A	K	M	V	L	E	T	G	E	H	P	G	A	L	K	D	M
Query Conservation								.
Alig confidence								.																										.	.	.																																				.	.	.
Template Conservation																																		.	.	.																																				.	.	.
Template Sequence		L	L	S	G	L	H	A	R	Y	V	E	I	D	A	A	E	H	D	C	V	T	S	Q	I	S	H	F	P	H	I	I	A	.	.	.	S	S	L	X	K	Q	A	G	D	F	S	E	S	H	E	X	T	K	H	F	A	A	G	G	F	R	D	X	T	R	I	A	E	S	E	.	.	.	P	G	X	W	T	S	I
Template Known Secondary structure			T	G	G	G																				T								.	.	.															T													T	T	G	G	G	G	S		.	.	.
Template Predicted Secondary structure																																		.	.	.																																				.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.				.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.				.	.	.	.	.	.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.							.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.
Query Sequence		V	C	S	P	G	G	T	T	I	E	A	V	R	V	L	E	.	.	.	.	.	.	E	K	G	F	R	A	A	V	I	E	A	M	T	K	C	M	E	K	S	E	K	L	S	K	S
Query Conservation																		.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.
Template Conservation
Template Sequence		L	L	T	N	Q	E	A	V	L	D	R	I	E	N	F	K	Q	R	L	D	E	V	S	N	L	I	K	A	R	D	E	N	A	I	W	A	F	F	N	Q	S	R	Q	I	R	K	N
Template Known Secondary structure					S																								T	T
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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