Job Description P0A9L8 Confidence 99.38% Date Thu Jan 5 11:10:40 GMT 2012 Rank 101 Aligned Residues 156 % Identity 17% Template c2rafC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:putative dinucleotide-binding oxidoreductase; PDBTitle: crystal structure of putative dinucleotide-binding2 oxidoreductase (np_786167.1) from lactobacillus plantarum3 at 1.60 a resolution Resolution 1.60 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	I	G	F	I	G	C	G	N	M	G	K	A	I	L	G	G	L	I	A	S	G	Q	V	L	P	G	Q	I	W	V	Y	T	P	S	P	D	K	V	A	A	L	H	D	Q	F	G	I	N	A	A	E	S	A	Q	E	V	A	Q	I	A	D	I	I	F	A	A	V	K	P	G	I	M	I	K	V	L	S	E
Query Conservation
Alig confidence																										.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		X	E	I	T	I	F	G	K	G	N	X	G	Q	A	I	G	H	N	F	E	I	A	G	H	.	.	.	.	E	V	T	Y	Y	G	S	K	D	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	T	T	L	G	E	I	V	I	X	A	V	P	Y	P	A	L	A	A	L	A	K	Q
Template Known Secondary structure										S												T	T	T		.	.	.	.							T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S			S						S
Template Predicted Secondary structure																										.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.					.	.	.	.	.	30	.	.	.	.																				.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.														.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.							.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.
Query Sequence		I	T	S	S	L	N	K	D	S	L	V	.	.	.	.	.	.	.	.	.	.	.	.	.	V	S	I	A	A	G	V	T	L	D	Q	L	A	R	A	L	G	H	D	R	K	I	I	R	A	M	P	N	T	P	A	L	V	.	.	.	.	.	.	N	A	G	M	T	S	V	T	P	N	A	L	V	T	P	E	D
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.
Template Conservation
Template Sequence		Y	A	T	Q	L	K	G	K	I	V	V	D	I	T	N	P	L	N	F	D	T	W	D	D	L	V	V	P	A	D	S	S	A	A	Q	E	L	Q	Q	Q	L	P	D	S	Q	V	L	K	A	F	N	T	T	F	A	A	T	L	Q	S	G	Q	V	N	G	K	E	P	T	T	V	L	V	A	G	N	D	D	S	A
Template Known Secondary structure		T					T	T	S									B		T	T	T	S	S		B	S	S		T	T												T	T	S						S	T	T	S								S			T	T	T										S
Template Predicted Secondary structure
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		T	A	D	V	L	N	I	F	R	C	F	G	.	E	A	E	V	I	A	E	P	M	I	H	P	V	V	G	V	S	G	S	S	P	A	Y	V	F	M
Query Conservation														.
Alig confidence														.
Template Conservation
Template Sequence		K	Q	R	F	T	R	A	L	A	D	S	P	L	E	V	K	D	A	G	K	L	K	R	A	R	E	L	E	A	X	G	F	X	Q	X	T	L	A	A
Template Known Secondary structure									T	T	T	S	S								S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions