Phyre 2 alignment of P0A9L8 with c2o7qA

Job Description P0A9L8
Confidence 97.24% Date Thu Jan 5 11:10:40 GMT 2012

Rank 371 Aligned Residues 65

% Identity 15% Template c2o7qA_

PDB info PDB header:oxidoreductase,transferase Chain: A: PDB Molecule:bifunctional 3-dehydroquinate dehydratase/shikimate PDBTitle: crystal structure of the a. thaliana dhq-dehydroshikimate-sdh-2 shikimate-nadp(h)

Resolution 2.20 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																																																									.
Query SS confidence																																																									.
Query Sequence	K	K	I	G	F	I	G	C	G	N	M	G	K	A	I	L	G	G	L	I	A	S	G	Q	V	L	P	G	Q	I	W	V	Y	T	P	S	P	D	K	V	A	A	L	H	D	Q	F	G	I	N	A	A	E	S	A	Q	.	E	V	A	Q	I	A	D	I	I	F	A	A	V	K
Query Conservation																																																									.
Alig confidence																								.	.	.	.	.																													.
Template Conservation																								.	.	.	.	.
Template Sequence	L	T	V	V	V	I	G	A	G	G	A	G	K	A	L	A	Y	G	A	K	E	K	A	.	.	.	.	.	K	V	V	I	A	N	R	T	Y	E	R	A	L	E	L	A	E	A	I	G	G	K	A	L	S	L	T	D	L	D	N	Y	E	D	G	M	V	L	A	N	T	T	S
Template Known Secondary structure									S												T			.	.	.	.	.							S	S									T	T	T	T						G	G	G	T	T					S							S	S
Template Predicted Secondary structure																								.	.	.	.	.
Template SS confidence
	435	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.						.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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