Job Description P0A9L8 Confidence 99.84% Date Thu Jan 5 11:10:40 GMT 2012 Rank 43 Aligned Residues 239 % Identity 13% Template c2i76B_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of protein tm1727 from thermotoga maritima Resolution 3.00 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	F	I	G	C	G	N	M	G	K	A	I	L	G	G	L	I	A	S	G	Q	V	L	P	G	Q	I	W	V	Y	T	P	S	P	D	K	V	A	A	L	H	D	Q	F	G	I	N	A	A	E	S	A	Q	E	V	A	Q	I	A	D	I	I	F	A	A	V	K	P	G	I	M	I	K	V	L	S	E	I	T
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.																		.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.																		.	.	.	.
Template Sequence		L	N	F	V	G	T	G	T	L	T	R	F	F	L	E	C	L	K	I	G	Y	.	.	.	.	.	.	.	.	I	L	S	R	S	I	D	R	A	R	N	L	A	E	V	Y	G	.	.	.	.	G	K	A	A	T	L	E	K	H	P	E	V	V	F	V	I	V	P	D	R	Y	I	K	T	V	A	N	H	L	N
Template Known Secondary structure								S	T	T													.	.	.	.	.	.	.	.	B			S	S									T	T	T	T	.	.	.	.					T	T											S										T	T	T
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.																		.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.									.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40					.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.
Predicted Secondary structure																																																																									.
Query SS confidence																																																																									.
Query Sequence		S	S	L	N	K	D	S	L	V	V	S	I	A	A	G	V	T	L	D	Q	L	A	R	A	L	G	H	D	R	K	I	I	R	A	M	P	N	T	P	A	L	V	N	A	G	M	T	S	V	T	P	N	A	L	V	T	P	E	D	T	A	D	V	L	N	I	F	R	C	F	G	.	E	A	E	V	I	A	E	P
Query Conservation																																																																									.
Alig confidence		.	.	.																								.	.															.																													.
Template Conservation		.	.	.																								.	.															.
Template Sequence		.	.	.	L	G	D	A	V	L	V	H	C	S	G	F	L	S	S	E	I	F	K	K	S	G	R	.	.	A	S	I	H	P	N	F	S	F	L	E	K	A	L	.	E	X	K	D	Q	I	V	F	G	L	E	G	D	E	R	G	L	P	I	V	K	K	I	A	E	E	I	S	G	K	Y	F	V	I	E	K	K
Template Known Secondary structure		.	.	.		S	S								S	S	S		S	T	T	T		S	S	S		.	.							S				T	T	G	G	.	G		G	G	G									T	T													S	S
Template Predicted Secondary structure		.	.	.																								.	.															.
Template SS confidence
					78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100			.	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	I	H	P	V	V	G	V	S	G	S	S	P	A	Y	V	F	M	F	I	E	A	M	A	D	A	A	V	L	G	G	M	P	R	A	Q	A	Y	K	F	A	A	Q	A	V	M	G	S	A	K	M	V	L	E	T	G	E	H	P	G	A	L	K	D	M	V	C	S	P	G	G	T	T	I	E	A	V	R	V	L
Query Conservation
Alig confidence													.	.																									.	.
Template Conservation													.	.																									.	.
Template Sequence		K	A	Y	H	L	A	A	V	I	A	S	.	.	N	F	P	V	A	L	A	Y	L	S	K	R	I	Y	T	L	L	G	L	D	E	P	E	L	.	.	L	I	H	T	L	X	K	G	V	A	D	N	I	K	K	X	R	V	E	C	S	L	T	G	P	V	K	R	G	D	W	Q	V	V	E	E	E	R	R	E	Y
Template Known Secondary structure													.	.	T																T	T		S					.	.																S								S
Template Predicted Secondary structure													.	.																									.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.			.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190			.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	K	G	F	R	A	A	V	I	E	A	M	T	K	C	M	E	K	S	E	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	K	I	F	G	N	T	V	L	Y	D	E	I	V	K	L	L	R	E	V	A	E
Template Known Secondary structure					S	S		S
Template Predicted Secondary structure
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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