Job Description P0A9L8 Confidence 99.95% Date Thu Jan 5 11:10:40 GMT 2012 Rank 18 Aligned Residues 254 % Identity 15% Template c2f1kD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:prephenate dehydrogenase; PDBTitle: crystal structure of synechocystis arogenate dehydrogenase Resolution 1.55 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	G	F	I	G	C	G	N	M	G	K	A	I	L	G	G	L	I	A	S	G	Q	V	L	P	G	Q	I	W	V	Y	T	P	S	P	D	K	V	A	A	L	H	D	Q	F	G	I	N	A	A	E	S	A	Q	E	V	A	Q	I	A	D	I	I	F	A	A	V	K	P	G	I	M	I	K	V	L	S	E	I
Query Conservation
Alig confidence																									.	.	.	.
Template Conservation																									.	.	.	.
Template Sequence		K	I	G	V	V	G	L	G	L	I	G	A	S	L	A	G	D	L	R	R	R	G	H	.	.	.	.	Y	L	I	G	V	S	R	Q	Q	S	T	C	E	K	A	V	E	R	Q	L	V	D	E	A	G	Q	D	L	S	L	L	Q	T	A	K	I	I	F	L	C	T	P	I	Q	L	I	L	P	T	L	E	K	L
Template Known Secondary structure									S													T	T		.	.	.	.							S											T	T	S		S				S		G	G	G	G	T	T		S						S		G	G	G
Template Predicted Secondary structure																									.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.					.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.										.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.
Query Sequence		T	S	S	L	N	K	D	S	L	V	V	S	I	A	A	G	V	T	L	D	Q	L	A	R	A	L	G	H	D	R	K	I	I	R	A	M	P	N	T	P	A	L	V	N	.	.	.	.	.	.	.	.	.	A	G	M	T	S	V	T	P	N	A	L	V	T	P	E	D	T	A	D	V	L	N	I	F	R	C	F
Query Conservation																																														.	.	.	.	.	.	.	.	.
Alig confidence																.																														.	.	.	.	.	.	.	.	.
Template Conservation																.
Template Sequence		I	P	H	L	S	P	T	A	I	V	T	D	V	A	.	S	V	K	T	A	I	A	E	P	A	S	Q	L	W	S	G	F	I	G	G	H	P	A	G	T	A	A	Q	G	I	D	G	A	E	E	N	L	F	V	N	A	P	Y	V	L	T	P	T	E	Y	T	D	P	E	Q	L	A	L	R	S	V	L	E	P	L
Template Known Secondary structure		G	G	G	S		T	T								.	S			T	T	T									T	T										S			S	G	G	G			S	S	T	T	T	T									T	T													G	G	G
Template Predicted Secondary structure																.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		155		.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		G	.	E	A	E	V	I	A	E	P	M	I	H	P	V	V	G	V	S	G	S	S	P	A	Y	V	F	M	F	I	E	A	M	A	D	A	A	V	L	G	G	M	P	R	A	Q	A	Y	K	F	A	A	Q	A	V	M	G	S	A	K	M	V	L	E	T	G	E	H	P	G	A	L	K	D	M	V	C	S	P	G
Query Conservation			.
Alig confidence			.																																	.																														.	.	.
Template Conservation																																				.																														.	.	.
Template Sequence		G	V	K	I	Y	L	C	T	P	A	D	H	D	Q	A	V	A	W	I	S	H	L	P	V	M	V	S	A	A	L	I	Q	A	C	.	A	G	E	K	D	G	D	I	L	K	L	A	Q	N	L	A	S	S	G	F	R	D	T	S	R	V	G	G	G	.	.	.	N	P	E	L	G	T	M	M	A	T	Y	N	Q
Template Known Secondary structure		T																			T															.		T		S																					T	G	G	G	S	.	.	.												T
Template Predicted Secondary structure																																				.																														.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.				.	.	.	.	.	.	.	.	230	.	.	.	.
		234	.	.	.	.	.	240	.	.	.	.	.			.	.	.	.	250	.	.	.					.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure														.	.									.	.	.	.
Query SS confidence														.	.									.	.	.	.
Query Sequence		G	T	T	I	E	A	V	R	V	L	E	E	.	.	K	G	F	R	A	A	V	I	.	.	.	.	E	A	M	T	K	C	M	E	K	S	E	K	L
Query Conservation														.	.									.	.	.	.
Alig confidence														.	.									.	.	.	.
Template Conservation
Template Sequence		R	A	L	L	K	S	L	Q	D	Y	R	Q	H	L	D	Q	L	I	T	L	I	S	N	Q	Q	W	P	E	L	H	R	L	L	Q	Q	T	N	G	D
Template Known Secondary structure																								T	T
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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