Job Description P0A9L8 Confidence 99.87% Date Thu Jan 5 11:10:40 GMT 2012 Rank 39 Aligned Residues 248 % Identity 17% Template c2ep9A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:l-gulonate 3-dehydrogenase; PDBTitle: crystal structure of the rabbit l-gulonate 3-dehydrogenase2 (nadh form) Resolution 1.85 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.																									.	50	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	I	G	F	I	G	C	G	N	M	G	K	A	I	L	G	G	L	I	A	S	G	Q	V	L	P	G	Q	I	W	V	Y	T	P	S	P	D	K	V	A	A	L	H	D	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	G	I	N	A	A	E	S	A	Q	E
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.
Template Sequence		D	V	L	I	V	G	S	G	L	V	G	R	S	W	A	M	L	F	A	S	G	G	F	.	.	.	.	R	V	K	L	Y	D	I	E	P	R	Q	I	T	G	A	L	E	N	I	R	K	E	M	K	S	L	Q	Q	S	G	S	L	K	G	S	L	S	A	E	E	Q	L	S	L	I	S	S	C	T	N	L	A	E
Template Known Secondary structure									S													T	T		.	.	.	.							S																						T	T				S	S	S								T					S
Template Predicted Secondary structure																									.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30					.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		60	.	.	.	.	.	.	.	.	.	70	.	.			.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure															.	.
Query SS confidence															.	.
Query Sequence		V	A	Q	I	A	D	I	I	F	A	A	V	K	.	.	P	G	I	M	I	K	V	L	S	E	I	T	S	S	L	N	K	D	S	L	V	V	S	I	A	A	G	V	T	L	D	Q	L	A	R	A	L	G	H	D	R	K	I	I	R	A	M	P	N	T	P	A	L	V	N	A	G	M	T	S	V	T	P	N	A
Query Conservation															.	.
Alig confidence															.	.																																																							.
Template Conservation																																																																							.
Template Sequence		A	V	E	G	V	V	H	I	Q	E	C	V	P	E	N	L	D	L	K	R	K	I	F	A	Q	L	D	S	I	V	D	D	R	V	V	L	S	S	S	S	S	C	L	L	P	S	K	L	F	T	G	L	A	H	V	K	Q	C	I	V	A	H	P	V	N	P	P	Y	Y	.	I	P	L	V	E	L	V	P	H	P
Template Known Secondary structure			T	T	T		S								S														T	T			S	S								S	S								T	T		T	T	G	G	G								S	S	T	T	T	.										T
Template Predicted Secondary structure																																																																							.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.		.	.	.	.	.	.	.	160	.	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160		.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.							210
Predicted Secondary structure																									.																																																		.	.	.	.	.	.
Query SS confidence																									.																																																		.	.	.	.	.	.
Query Sequence		L	V	T	P	E	D	T	A	D	V	L	N	I	F	R	C	F	G	E	A	E	V	I	.	A	E	P	M	I	H	P	V	V	G	V	S	G	S	S	P	A	Y	V	F	M	F	I	E	A	M	A	D	A	A	V	L	G	G	M	P	R	A	Q	A	Y	K	F	A	A	Q	A	V	M	.	.	.	.	.	.	G
Query Conservation																									.																																																		.	.	.	.	.	.
Alig confidence																									.													.	.	.	.	.											.																						.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.											.
Template Sequence		E	T	S	P	A	T	V	D	R	T	H	A	L	M	R	K	I	G	Q	S	P	V	R	V	L	K	E	I	D	G	F	V	L	N	R	L	.	.	.	.	.	Q	Y	A	I	I	S	E	A	W	R	.	L	V	E	E	G	I	V	S	P	S	D	L	D	L	V	M	S	D	G	L	G	M	R	Y	A	F	I	G
Template Known Secondary structure		T																T	T							S	S			T	T	T	T					.	.	.	.	.											.				T	T	S	S											T	T						T	T	S
Template Predicted Secondary structure																																						.	.	.	.	.											.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.						.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	K	M	V	L	E	T	G	E	H	P	G	A	L	K	D	M	V	C	S	P	G	G	T	T	I	E	A	V	R	V	L	E	E	K	G	F	R	A	A	V	I	E	A	M	T	K	C	M	E	K	S	E	K	L	S	K
Query Conservation
Alig confidence																				.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.
Template Sequence		P	L	E	T	M	H	L	N	A	E	G	M	L	S	Y	S	D	R	.	.	.	.	.	.	Y	S	E	G	M	K	R	V	L	K	S	F	G	S	I	P	E	F	S	G	A	T	V	E	K	V	N	Q	A	M	C	K	K	V
Template Known Secondary structure									T	T	T	S								.	.	.	.	.	.											T																							S
Template Predicted Secondary structure																				.	.	.	.	.	.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.							.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions