Job Description P0A9L8 Confidence 98.96% Date Thu Jan 5 11:10:40 GMT 2012 Rank 107 Aligned Residues 235 % Identity 15% Template c1yrlD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:ketol-acid reductoisomerase; PDBTitle: escherichia coli ketol-acid reductoisomerase Resolution 2.60 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	I	G	F	I	G	C	G	N	M	G	K	A	I	L	G	G	L	I	A	S	G	Q	V	L	P	G	Q	I	W	V	Y	T	P	S	P	D	K	V	A	A	L	H	D	Q	F	G	I	N	A	A	E	S	A	Q	E	V	A	Q	I	A	D	I	I	F	A	A	V	K	P	G	I	M	I	K	V	L	S	E
Query Conservation
Alig confidence									.	.	.	.	.	.												.	.	.	.										.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.												.	.	.	.										.	.	.	.	.	.	.
Template Sequence		K	K	V	V	I	V	L	.	.	.	.	.	.	N	Q	G	L	N	M	R	D	S	G	L	.	.	.	.	D	I	S	Y	A	L	R	K	E	.	.	.	.	.	.	.	A	I	A	E	G	F	K	V	G	T	Y	E	E	L	I	P	Q	A	D	L	V	I	N	L	T	P	D	K	Q	H	S	D	V	V	R	T
Template Known Secondary structure		S							.	.	.	.	.	.								T	T	S		.	.	.	.					B			T	T	.	.	.	.	.	.	.	G	G	G						B		S	T	T	T	S	T	T		S								G	G	G
Template Predicted Secondary structure									.	.	.	.	.	.												.	.	.	.										.	.	.	.	.	.	.
Template SS confidence
		38	.	40	.	.	.	.							.	.	.	.	.	50	.	.	.	.	.					.	.	.	.	60	.	.	.	.								.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.								.	.	.	130	.	.	.	.	.	.				.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.											.	.	.
Query SS confidence																																														.	.	.	.	.	.	.											.	.	.
Query Sequence		I	T	S	S	L	N	K	D	S	L	V	V	S	I	A	A	G	V	T	L	D	Q	L	A	R	A	L	G	H	D	R	K	I	I	R	A	M	P	N	T	P	A	L	V	.	.	.	.	.	.	.	N	A	G	M	T	S	V	T	P	N	.	.	.	A	L	V	T	P	E	D	T	A	D	V	L	N	I	F	R
Query Conservation																																														.	.	.	.	.	.	.											.	.	.
Alig confidence													.																																	.	.	.	.	.	.	.											.	.	.
Template Conservation													.
Template Sequence		V	Q	P	L	M	K	D	G	A	A	L	.	G	Y	S	H	G	F	N	I	V	E	V	G	E	Q	I	R	K	D	I	T	V	V	M	V	A	P	K	C	P	G	T	E	V	R	E	E	Y	K	R	G	F	G	V	P	T	L	I	A	V	H	P	E	N	D	P	K	G	E	G	M	A	I	A	K	A	W	A	A
Template Known Secondary structure						S		T	T				.			S	S	S					T	T						T	T	S								S		S	S	S								T	T											G	G	G		T	T	S
Template Predicted Secondary structure													.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		153	.	.			.	.	.	.	160									.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure					.	.						.	.	.	.	.	.	.	.
Query SS confidence					.	.						.	.	.	.	.	.	.	.
Query Sequence		C	F	G	.	.	E	A	E	V	I	.	.	.	.	.	.	.	.	A	E	P	M	I	H	P	V	V	G	V	S	G	S	S	P	A	Y	V	F	M	F	I	E	A	M	A	D	A	A	V	L	G	G	M	P	R	A	Q	A	Y	K	F	A	A	Q	A	V	M	G	S	A	K	M	V	L	E	T	G	E	H	P
Query Conservation					.	.						.	.	.	.	.	.	.	.
Alig confidence					.	.						.	.	.	.	.	.	.	.																												.	.	.	.																													.	.
Template Conservation																																															.	.	.	.																													.	.
Template Sequence		A	T	G	G	H	R	A	G	V	L	E	S	S	F	V	A	E	V	K	S	D	L	M	G	E	Q	T	I	L	C	G	M	L	Q	A	G	S	L	L	C	F	D	K	L	V	.	.	.	.	E	E	G	T	D	P	A	Y	A	E	K	L	I	Q	F	G	W	E	T	I	T	E	A	L	K	Q	G	G	.	.	I
Template Known Secondary structure			T	T																									T	T	S																.	.	.	.		T	S																										.	.
Template Predicted Secondary structure																																															.	.	.	.																													.	.
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.					.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.			270
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	L	K	D	M	V	C	S	P	G	G	T	T	I	E	A	V	R	V	L	E	E	K	G	F	R	A	A	V	I	E	A	M	T	K	C	M	E	K	S	E	K
Query Conservation
Alig confidence											.	.	.													.
Template Conservation											.	.	.													.
Template Sequence		T	L	M	M	D	R	L	S	N	.	.	.	P	A	K	L	R	A	Y	A	L	S	E	Q	.	L	K	E	I	M	A	P	L	F	Q	K	H	M	D	D	I	I	S
Template Known Secondary structure						T	T	S			.	.	.													.
Template Predicted Secondary structure											.	.	.													.
Template SS confidence
		271	.	.	.	.	.	.	.	.				280	.	.	.	.	.	.	.	.	.	290	.		.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions