Job Description P0A9L8 Confidence 99.88% Date Thu Jan 5 11:10:40 GMT 2012 Rank 37 Aligned Residues 256 % Identity 16% Template c1yb4A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:tartronic semialdehyde reductase; PDBTitle: crystal structure of the tartronic semialdehyde reductase from2 salmonella typhimurium lt2 Resolution 2.40 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		K	K	I	G	F	I	G	C	G	N	M	G	K	A	I	L	G	G	L	I	A	S	G	Q	V	L	P	G	Q	I	W	V	Y	T	P	S	P	D	K	V	A	A	L	H	D	Q	F	G	I	N	A	A	E	S	A	Q	E	V	A	Q	I	A	D	I	I	F	A	A	V	K	P	G	I	M	I	K	V	L	.	.
Query Conservation																																																																																.	.
Alig confidence																										.	.	.	.																		.	.																																.	.
Template Conservation																										.	.	.	.																		.	.
Template Sequence		X	K	L	G	F	I	G	L	G	I	X	G	S	P	X	A	I	N	L	A	R	A	G	H	.	.	.	.	Q	L	H	V	T	T	I	G	P	V	A	D	E	L	L	S	L	.	.	G	A	V	N	V	E	T	A	R	Q	V	T	E	F	A	D	I	I	F	I	X	V	P	D	T	P	Q	V	E	D	V	L	F
Template Known Secondary structure										S	T	T											T	T		.	.	.	.							S	S								T	T	.	.	T		B			S	S							T		S							S	S
Template Predicted Secondary structure																										.	.	.	.																		.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.					.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.			.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
				81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.			.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure		.	.																						.	.																																																							.
Query SS confidence		.	.																						.	.																																																							.
Query Sequence		.	.	S	E	I	T	S	S	L	N	K	D	S	L	V	V	S	I	A	A	G	V	T	.	.	L	D	Q	L	A	R	A	L	G	H	D	R	K	I	I	R	A	M	P	N	T	P	A	L	V	N	A	G	M	T	S	V	T	P	N	A	L	V	T	P	E	D	T	A	D	V	L	N	I	F	R	C	F	G	.
Query Conservation		.	.																						.	.																																																							.
Alig confidence		.	.																						.	.																																																							.
Template Conservation
Template Sequence		G	E	H	G	C	A	K	T	S	L	Q	G	K	T	I	V	D	X	S	S	I	S	P	I	E	T	K	R	F	A	Q	R	V	N	E	X	G	A	D	Y	L	D	A	P	V	S	G	G	E	I	G	A	R	E	G	T	L	S	I	X	V	G	G	E	Q	K	V	F	D	R	V	K	P	L	F	D	I	L	G	K
Template Known Secondary structure		S	T	T	S	S	T	T	S			T	T							S																T	T	T										S								T								S
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.			.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.							.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.																											.	.	.	.	.	.
Query SS confidence																									.	.																											.	.	.	.	.	.
Query Sequence		E	A	E	V	I	A	E	P	M	I	H	P	V	V	G	V	S	G	S	S	P	A	Y	.	.	V	F	M	F	I	E	A	M	A	D	A	A	V	L	G	G	M	P	R	A	Q	A	Y	K	F	A	.	.	.	.	.	.	A	Q	A	V	M	G	S	A	K	M	V	L	E	T	G	E	H	P	G	A	L	K	D
Query Conservation																									.	.																											.	.	.	.	.	.
Alig confidence																									.	.										.																	.	.	.	.	.	.
Template Conservation																																				.
Template Sequence		N	I	T	L	V	G	G	N	G	D	G	Q	T	C	K	V	A	N	Q	I	I	V	A	L	N	I	E	A	V	S	E	A	L	V	.	F	A	S	K	A	G	A	D	P	V	R	V	R	Q	A	L	X	G	G	F	A	S	S	R	I	L	E	V	H	G	E	R	X	I	N	R	T	F	E	P	G	F	K	I	A
Template Known Secondary structure								S	T	T																										.					T	T											T	S	S	S	S														T	T					S	S	B
Template Predicted Secondary structure																																				.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	V	C	S	P	G	G	T	T	I	E	A	V	R	V	L	E	E	K	G	F	R	A	A	V	I	E	A	M	T	K	C	M	E	K	S	E	K	L	S	K
Query Conservation
Alig confidence						.	.	.
Template Conservation						.	.	.
Template Sequence		L	H	Q	K	.	.	.	D	L	N	L	A	L	Q	S	A	K	A	L	A	L	N	L	P	N	T	A	T	C	Q	E	L	F	N	T	C	A	A	N	G	G
Template Known Secondary structure						.	.	.												T	T																			T	T
Template Predicted Secondary structure						.	.	.
Template SS confidence
		234	.	.	.				.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions