Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9L8
Confidence97.75%DateThu Jan 5 11:10:40 GMT 2012
Rank312Aligned Residues113
% Identity15%Templatec1obbB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:alpha-glucosidase; PDBTitle: alpha-glucosidase a, agla, from thermotoga maritima in2 complex with maltose and nad+
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10...... ...20.........30.........40......... 50.........60.........70
Predicted Secondary structure 


..









...........





Query SS confidence 












. .
































. . . . . . . . . . .




















Query Sequence  KIGFIGCGNMGKA. . ILGGLIASGQVLPGQIWVYTPSPDKVAALHDQF. . . . . . . . . . . GINAAESAQEVAQIADIIFAA
Query Conservation 





 
 

  ..

  
   
      
 
  
       
    ...........               




 
Alig confidence 












..
































...........




















Template Conservation 

 





          
     
   

 
 


  

                   
  
 
   

 


 

 
Template Sequence  KIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMNLDDVIIDADFVINT
Template Known Secondary structure  TTT
T
GGGTT

S
T


S
TT
S
Template Predicted Secondary structure 
























Template SS confidence 















































































   5....10.........20.........30.........40.........50.........60.........70.........80....
 
   71 ........80.........90.........100........
Predicted Secondary structure  ..........................................











Query SS confidence 
. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .




































Query Sequence  V. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . KPGIMIKVLSEITSSLNKDSLVVSIAAGVTLDQLARA
Query Conservation 
..........................................       
   
         
 
             
Alig confidence 
..........................................















.



















Template Conservation    


      
  
  
 
       

    
 


  


 


   

  
    .
 
 


 


  
 
 
  
Template Sequence  AMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLS. PKAWYLQAANPIFEGTTLVT
Template Known Secondary structure 

TTTT
TT
TT
BTTB

TT

SSS

.TTS
SS
Template Predicted Secondary structure 



























.




Template SS confidence 















































































   85....90.........100.........110.........120.........130.........140... ......150.........160...
 
   109110.......
Predicted Secondary structure 





Query SS confidence 








Query Sequence  LGHDRKIIR
Query Conservation         
 
Alig confidence 








Template Conservation 
    



Template Sequence  RTVPIKAVG
Template Known Secondary structure  S
S
Template Predicted Secondary structure 




Template SS confidence 








   164.....170..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions